NONHSAT081595

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT081595

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

4482 nt

Genomic location

chr21-:29488413..29600986

Exon number

6

Exons

29488413..29492193,29535921..29536036,29542397..29542462,29584559..29584667,29598203..29598310,29600681..29600986

Genome context

Sequence
000001 CAAGATAGGT TGAAAGGGGA GTTCGTAGTC ATCTCTTCTA ATCAGGAGAT CCCTGAAAGC CGAACATTTA AATGTTCTCT 000080
000081 TCTTGAAATA AAAATACCAT AGTTTTAGTT AGGAATGTGC TATGTTGAAA ATAACAGAAA AACTGACCTC TGTGGCTTAA 000160
000161 ACAAGTAAGG ATTTATTTTC CTTCCGTAGC TGGAGGAAGG GAGGTGCAGC TTTGGCTCAG CTCTTAACAG TGCAACATCT 000240
000241 AGTGCCTCTA TAGTTCTCTT GGACACAGAT GGCTGCTTTC GAAGAAGAAA GAAGTGGAAA GTGATGGAGT TTCTATGCTC 000320
000321 CAGCTCTCTT TGCCTGCTGC CATCCACGTA AGATGTGACT TGCTCCTCTT TGCCTTCTGC CATAATTGTG AGCCCCCCTC 000400
000401 AGCCATGTGG AATGGCCCAC AGCCAAGCCA TTGAGAGACA AGTCCATGGG AGACAAATTA GCTCATGCAG CTGAGATGTC 000480
000481 CTGGAGATTT TCCACAGCAC CACTTGGCCA GTGCCTAGAC AAGAGGCCAT CTTTGAAGAA GTAAACAAGT ACCATACACT 000560
000561 AAAGGGATGA CAGAACAACG AAACAAAAGG CTTCCGAGGC GATCCGGCAA CATCAGTCTT CAGCCGCTAA GCCAAGAAGA 000640
000641 TCTGGGAAGG AGTCAATCAG AGAGCCTTGG GCCAGAGTTC CAGGGGCTGT GGAAGTGGCT GCCAGGGTGT GGTGACGCAA 000720
000721 CCTGTAGTCC CAGCACTTCG GGAGGCCGAG GTGGCAGATC ACTCGAGCTC AGGAGTTCAA GAGCAGCCTG GCAAAATCCC 000800
000801 GTGACTCCAG AAGTATGAAA ATTAGCCGGG CGTGGTGGCG CACACCTGTA GTCCTAGCTA CTTGGGAGGC TGAGGTGGGA 000880
000881 GGATTGCGTG AGCTCGGGAG GTTAAGGCTG CAGTGAGCTG AGATCGCACC ACCACACTGC GGTCTGGGTG ACAGAGTGAG 000960
000961 ATCCTGTCTC AAAAAACAAA ATAAAATATA ACAAAACTGG TATAGACATT CATATGTAGG TTTTTGTATG GATTTGGTAT 001040
001041 GATTTTTATT GTTAAAGTTT AGTTTTTATG TTTTAGAGTT ATATATATAT ATGAATCATT TAATTTGTAT GCTTATGTGT 001120
001121 TTGGCTCCTT TTCCTCAGCA TAATGTTTTA AGATTCCTCT ATGAATCAGT TGCATATATC AGGAGTTTTT TCTTATAGTT 001200
001201 CAGTAATATT CCATTATGTG AATATAGTAT AATTTCTTTA TCTCTTCAGC TGTTAATGGA CATTTAGGGT GTTCAGTTTG 001280
001281 GGGATATTTG AAATGTTATG AACATTTTTG TACAGATCTT ATGATACATA CATTTTTATT TTTCTTATCA GAATGATATT 001360
001361 ACTGAGTCAT GTGATATTTT TATTTTTAAC ATTATGTAAA CTGTTTTAAA TAGAACAATT GTTTTCCAAA GTAGCTGTGC 001440
001441 TATTTATACC TTCAGTCAAA ATATACAAAA GTTTCTTGTT ACTGCACATA ATCTCCAACA GAAAGGACTT ATGGTAAATC 001520
001521 TTTAACAAAT TTTAGTCATT CTACTCCCTG TTGGTGGTAT CTTTTTGTGG TATTTTTGAA AGAAATTGAC TTTTATTGAG 001600
001601 ATATGATTTA CATATAATTA AATGACCACA TTAAGAGTAC ACTTTGATAA GTTTTGCTAA CTGTACATAT CAATGTAACC 001680
001681 ACCACAATTG AAAATTAGAT CTTTTTTATC TTCTCAAAGT GTTCCTTTAT GCTCTTCTGT AGACAATCTT CCCCAGTCCT 001760
001761 CAACACAGGC ACCAATGGAT ATGAATTCAG TCATTGTCGA CTGGTGTTCT GCCTGTCCTA GATGTCACGT AAATGGATTC 001840
001841 AAATAGATGT GTGCTCTTGT GTCTGACTCC TTTTGTTCAG CGTGGTGCTT TTGAGATTTA TCTGTGTCAT TTGGGGTATC 001920
001921 AGTAATTCAT ATCTTTTATT TCCAACTAGG GTTGTGTGAT TATACCACAA TGTCTTTTGC AAATTAGTTG TTTCATTTTA 002000
002001 TATATTTTAT ATGTATCAGC AGTTTATGAG TTATAAATAA CTTTTCTTTA TAAATTACCC AGTTTCAGGT AGTTCTTTGG 002080
002081 TGGTGTTTTC CTGTTGCTCT CCGTTCTAAC ACCTGATATT GTTGGTCTTA CTTTTAGCCA TTTTAGTACT AGATGCTCCC 002160
002161 CGACTCACGA TGGGGTTATG CCCCAATAAA TCCATTGTTA AGTTGAAAAT ATCACAAGTT GAAAATGCAT TTTTAATACA 002240
002241 CTTTAACTAT CAAACGTCAT AGCTTAGCCT AGCCTACCTT AAACAGGCTC ACAACACTTA CATTATTCTA CACTTGAGCA 002320
002321 AAATCATCTG GCAACACAGC AAACTGTAGA GTATCTCTTG TTTACTCTGG TGATCTTGTG GCTGACTGGA AGCCTTAGCT 002400
002401 CCCTGCCACT GTCCAACATC CCAAGAGGGT TTTCTACTGC TTTCTACTGA ATGTGTATTG CTTTTGCACC ATTTTAAAGT 002480
002481 AAAAAAAGTT ATATGTCAAA TCATCAAAAG TTGTTTTGAT GAGATTTTCT GTTTGTGTAG TAATATTTCA CTTTAGTTAT 002560
002561 AATTTCTGTA TACCTGACAG CCAATTATAT TGTGTATGTT TATATTTATT TACTTATTTC ATACCTTCTT GTATGAAATT 002640
002641 GTTGTCCAAA TTTTTTGTCC AGTTTCTAAA TCACAGTTTA CTTTCTCATT ATTAATATGT TTTTTATTTT TATTTTTTAT 002720
002721 TATTTTTGTT TTTAGACGGA GTCTCTTCTC TGTCGCCCAG GCTCGAGTGC AGTGGCGCAA TCTCTGCTCA CTGCAAGCTC 002800
002801 CGCCTCCTGG GTTCACGCCA TTCTCCTGCC TCAGCCTCCC GAGTAGCTGG GACTACAGGC GCCCGCCACC ACACCTGGCT 002880
002881 AAGTTTTGTA TTTTTTTAGT AGAGACGGGG TTTCACCGTG GTCTACATCT CCTGACCTCG TGATCTGCCC GCCTCGGCCT 002960
002961 CCCAAAGTGC TGGGATTACA GGCGTGAGCC ACCGCACCCG GCCAAGTTTT TTCTTTTGTA AAATTTGAAT ATATAAGTCC 003040
003041 CATATAAGGT CAATTTATTC TTTTTTCTCG CATGGTCAGT GCTATACAAG ATGATAAAGA TATATGCCTA CCTTTTCTTT 003120
003121 TGTTAAGTTT ATATTTCAGC TCATATGTTA AATCTATAAT CCATTTTGAG TTAATTTTGT AGATGGGGTG AGGTAAGAAT 003200
003201 AGATACACAA CTTTTAGGCT GATATTCAGT TGTCCTAGCA CTAGTTTATT GAAGATACTT TTTTCCCCAT TAAATGTCCT 003280
003281 TGAACTTTTT CAAAAAAGCA ATTGACTATA TGTGTTTGGG TGTTGATACA GTTTGAGTCT GTGTCCCCAC CCAAATCATG 003360
003361 TCAAATTGAA ATCCCCAATG TTGGAGGTGG GGCCTGGTGG GGAGTGATTG GTTCATGGGG ACAGATTTTC CCTTTGGTGT 003440
003441 TGTTGTTATG ACAGCGAGTG AGTTATGAGA TCTGGTTGTT CAAAAGTGTG TAACACCTCC CCACTCTCTC TTCCTCCTGC 003520
003521 TCTGGCCATG TAAGACGTGA CTGCTTGCCC TTCACCTTCC GTCATGGTTG AAAGTTTCCT GAGGTCTCCC CAAACATGCT 003600
003601 TCCCATACAG CTTCCCAACT GTGAACAAAT GAAATCTCTT TTCTTTATAA ATTACCCAGT TTCAGGTAGT TCTTTACAGT 003680
003681 AGTGAGGGAA CAGACTAATA CAGTTATATC CTGTTCCATC TTTTTTCTAA TGCTTTGCTG CATTGTCTTA TAACACAGCT 003760
003761 TTATAATCTT AAAATCATAA CCTGTAGGCC CTCAAAATCT TTTCTTTTTA AAAATTATTT TGGCTATTGA AGGTCCTTTG 003840
003841 TGTTTCCGTA TAAATTTGAC AATTGTCTGG TTGATTTCCT CAAAAATTCT TTTGGCTTCC AAAATTTGAA AGCAGCCTAA 003920
003921 GTGTTATCAA GAATTGAATG GATAAATAAA ATGCAGTACA GATACACAAT GGAGTACTAT TCAGCAATAG AAAGAATGAA 004000
004001 ATCCTGTCAT TTGCAACAAC ATGGATGGAA CTGGAGGTCA TTATGTTAAG TGAAATAAGC CATACACAGA AAGACAAACT 004080
004081 TCATATATTC TCACTTTTTT GCGAGAGCTA AAAATTAAAA CAATTGAACT CATGGAGATG GAGAATAGAT TGATGGTTAC 004160
004161 CAGAGGCTTG GAAGGATAGT GGGAGTGGGG AATGTGGATG GTTAATGGGT ACAAAAATAC AGGTTTATAG GGTTAATACC 004240
004241 TGTTGATACA ACAACATGGT AGCTACAGCC AACAATAATT TATCATACAT TTAAAAATAA CCAAAACAGT ATAATTGAAA 004320
004321 TATTTGTAAC ACAAGGAAAA TGATAAGTAC CTGAGGTGAC GGGTACCCTA TTTACCCTGA TGTGATTATT ACACATTGTA 004400
004401 TGTCTGTATC AAAATATCTC AGGTACTGAT AAATGCATAC ACCTACTATG TACCCATAAA AATCAAAAAT TAAAAATTAA 004480
004481 AC
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Predicted Small Protein

Name NONHSAT081595_smProtein_566:817
Length 84
Molecular weight 9081.9926
Aromaticity 0.0481927710843
Instability index 109.991566265
Isoelectric point 9.48565673828
Runs 13
Runs residual 0.0165997322624
Runs probability 0.0344258285434
Amino acid sequence MTEQRNKRLPRRSGNISLQPLSQEDLGRSQSESLGPEFQGLWKWLPGCGDATCSPSTSGG
RGGRSLELRSSRAAWQNPVTPEV
Secondary structure LLHHHLLLLLLLLLLEEELLLLHHHLLLLLLLLLLHHHHHHHHHLLLLLLLLLLLLLLLL
LLLEEEEEELLHHHHLLLLLLLL
PRMN -
PiMo -