NONHSAT081278
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT081278 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
overlapping(AS) |
Length |
673 nt |
Genomic location |
chr21-:18855804..19053993 |
Exon number |
5 |
Exons |
18855804..18855880,18883716..18883809,19032113..19032214,19046937..19047305,19053963..19053993 |
Genome context |
|
Sequence |
000001 ATAAAACCAA GCTGTACTCC GACCACCTCG GTTTTGCCAT TAAAGTGATG CAAAAACCTC AATTACTTTT GCACGAACCT 000080
000081 AGTAAGTACT TACTCTGTTT TTCCAGTGGT CAGAAGAGTC TTTCATTTGG AAGTTTCTAA TGCAAGCTAA TTTTGTGAGA 000160 000161 AAAAACTCTC ACATCATGTA TCTGCCCATT TTAGAGGAAG GATAAGCATA TGGTACAACA TCAGTGGATG GAACAGAAGC 000240 000241 CGCAACTAGT TGAGGGTATT TCCTTGCCTA CAGCTCCATC AAGCATTAAG AGAGACTTTC CAGGCCAGCT CCAGATGAAA 000320 000321 AGTGCTTATT TCAGAATCTT TATTTTGGGG GTCTGTGCCA TTATGTCAAG ATTCTAAAAC TCAAAATTGG AGCCTGAAAA 000400 000401 GTCATGTCTC TCGCTATGAG AGTGTTGGGG CTCAGAAAGC GATACCCCAA AGACTGGTGC TTTGAAATGT TGAGAGGACT 000480 000481 TAGAAGCTGC CTCAGAATCA AGGAGGCTGA GGCAGGAGAA TGGCGTGAAC CCCGGGAGGG GGAGCTTGCA GTGAGCCGAG 000560 000561 ATTGCGCCAC TGCACTCCAG CCTGGGCGAC ACAGCGTGGG TGTGGTGGCA CATGCCTGTA GTCCCAGCTA CCTAGGAGGC 000640 000641 TGAGACAGGA GAATCACTTG AACCCAGGAC ACA |
Predicted Small Protein
Name | NONHSAT081278_smProtein_209:376 |
Length | 56 |
Molecular weight | 6341.4746 |
Aromaticity | 0.109090909091 |
Instability index | 59.6545454545 |
Isoelectric point | 9.62298583984 |
Runs | 11 |
Runs residual | 0.0484848484848 |
Runs probability | 0.037401037401 |
Amino acid sequence | MVQHQWMEQKPQLVEGISLPTAPSSIKRDFPGQLQMKSAYFRIFILGVCAIMSRF |
Secondary structure | LLLLHHHHLLLLEEELLLLLLLLLLLLLLLLLHHHLHHHHHHHEEHHHHHHHLLL |
PRMN | - |
PiMo | - |