NONHSAT081094
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT081094 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1354 nt |
Genomic location |
chr21+:14410651..14418742 |
Exon number |
2 |
Exons |
14410651..14410745,14417484..14418742 |
Genome context |
|
Sequence |
000001 GATCCACAAA GCTGCCTCCC GGGCCAAGCC TGGAAGCTGG AGAGGATGAT GAAGAAGACG ACAATGGACC TGAACATAAG 000080
000081 AGATGCGAAG AAGAGGCTGG CCACACACCA CTTTTATTGG CCATAAGGAA AAGAAGTGAG CAAATTGTGG AATTTTTACT 000160 000161 GACAAAAAAA TGCAAATGCA AATGGAGTTG ATAAGTTTAA ATGGTATAGT AGTTTTTTTA TTAAAAAACA CTTGAGTAGT 000240 000241 GTGCTAGAGT AATAACACTC AAGTCAGaaa tattaaatta ataacattta cttaaaatta ttaGATTATA CAGAAAAATA 000320 000321 TCAAGACAAA TTATCAGTTA GGAAGAAAAG CAATTATTTG GACTGGTCAA CACAAAGAAC AGTATACAGT AGGATTTTCT 000400 000401 TCTTTTATTA TACTGACTGA TTCTTATTTG TAATCTGATG TTTTTGGTTG CATTATCTTC TATTAGCTAA AGTGGTTCTG 000480 000481 TATTAGTTTT AAGAAGTATG AATTTTTAGT TTACTTTATA ATTCAATATT GAATGATTAA CACCTTTATA GTATTTTTCT 000560 000561 AACTTCTGTT TTTCATACAC TTTTAAAAAA TGCAATATTT gctgggcatg gtagctgttg tctgttatcc cagcaacttt 000640 000641 gggaggccaa gtgggtagat cacctgaggc caggagtttg agaccagcct agccaacatg gtaaaacctc atctcaatga 000720 000721 aaaatataaa aattagccaa ccatggtggc acaagcctgt agtcccaggt actcaggaCA ATATTATTCC TAATATTGTT 000800 000801 TTAAGTCTTC AGATTGCTCT CACTTGTCCG ACTTCTAGCT AATTTTGAAG TACAAAATAT TATATCAGAC TAAGGAGGAA 000880 000881 ATAGATAATT CTTCACTTAA AACTTTGCCT CTTTTAGATT AGTGAACAGA ACATATTTTC TTGCCCCTCA GTGGACTTTA 000960 000961 TGTTAGCCAA TTCTACTATG CCATATCCCA GTGAGACATG AGTCTTTTCA CCCCTTCCTT TTAGCCTTGG TCGTGATTTA 001040 001041 CAAGGATAAA CACTTGAGCA CTCAAGATAC TTAACATTTG TTAATACATG TAAATGGTTA ATTCTATACT GACAGGCACA 001120 001121 TATTAAATTG GTTCATTCCT AATAATGAAG TTATGTCTGT TATTTTAGCA CAGCCCTCAT GCTTGCCATA TGTCATGGAT 001200 001201 CATCAGAGAT AGTTGGCACG GTTCTTCAGC AAAATGTTGA CATCTGTGCT GAAGCTACAT GTGGAATGAT TGCAGAACGT 001280 001281 TATGCTGTTG CTTGTGGATT TAATCTCTAA GTGTTTACAT TTAAAGGCTA GGTGAGATTT TATAGTTTGT TTCA |
Predicted Small Protein
Name | NONHSAT081094_smProtein_1178:1309 |
Length | 44 |
Molecular weight | 4503.2061 |
Aromaticity | 0.046511627907 |
Instability index | 44.988372093 |
Isoelectric point | 4.39630126953 |
Runs | 8 |
Runs residual | 0.0287431408414 |
Runs probability | 0.0210983041866 |
Amino acid sequence | MLAICHGSSEIVGTVLQQNVDICAEATCGMIAERYAVACGFNL |
Secondary structure | LEEEELLLLLEEEHHHHLLHHHHHHHHHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |