NONHSAT080753

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT080753

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2942 nt

Genomic location

chr20-:61141520..61145916

Exon number

5

Exons

61141520..61142574,61142913..61144065,61144748..61144909,61145034..61145207,61145519..61145916

Genome context

Sequence
000001 AGCAGTCTGC AGGCCTGGGC AGGCGGCTCT GTAAAGGATG CGGGTGCTTT GTGGTGGTGA GAGAGAGGGT ATGCAGCAGA 000080
000081 CGTGGCCATA AATCACCCTC CTCACGGCAG CCCCACACCC ACGGACCAGG GCACGGGCAC AGGGCCATCT CCTTCCAGGA 000160
000161 GAAGGGCTGG TGTGGGTGGC CAGATCTGAC AGCCCCCAGG CCGTAGGACA GAGCCAGAAG ACAGAGCAGT TCCCCCGTTT 000240
000241 ACCCATAGCA CCAGCCTCAC AGTAACAGCC GGCACACAGC ACTTAGGCTG CCTGGTGTTC CAGAAGCTTC TGCAGGGGCT 000320
000321 CTATGCTGCA ctcaaggcat ccctaagagg agagcatttt gctgtcccca ctttacggag aaggaacgtg ggctcaggGT 000400
000401 GGTTTAAGGC GTGAATGAAT GAAGGAGCAA GCAGTAAGCC CCGACAGCAA GGCCACCACA GCCCTCGCCC CACAGGGACG 000480
000481 CCTGAGCAAG GACCCAAGCA GGGGACAAGC AGGCTCACCC CGCCCTTGCG GGGCTGACCA CGAGGCCCCG TCCGGTGGAA 000560
000561 CACGCCATGA CGcttcaGGA GGCTCATGTA GCTGGCGCCG TATGGGACAG CGGGGGAGAG AGAAAATGCA CAGCCCAGGG 000640
000641 AATGTGGAGA CAGGCCCAGC GCCAGGCATG GGGGCCGGAA GGAGCAGCCG GGGAGCAGGG GGCAGGGCCT GGAGTCCCGC 000720
000721 CTTGCAGGTC AGAGATCTGA ACCTGCCCCA GCCCCAGGAC TCTGAGTGCA GCAAGAGGGG AGCCGGGCTG GAGAGTGGGG 000800
000801 AGCACGGAGA CTGTGGCCTG GATGGTGCCA GAGCAAACAG GAGAGAGGCT GCCCAACGCA GAGGCTGCAG CACAGACCAG 000880
000881 AGGGTCCCGG GGCTGACTGG GTGGGGGCAG CTCCCAGCGA GAGGCCCCTG GGATTTGGGT AAGTAGAGGC ACATGCAGAC 000960
000961 TCTGGCCACA GGGCACCTCG CGCACGAGGG GAGTTCACCA CACAAGCTGA GCGGAGGGCG GACGCAGGAG AGCAGCGGTT 001040
001041 TCTCGGAAGC CAAGGGCGGT CATGGAGCCC CACGCCACAG CGCTTCCCAC GGGGCCACAC CATCCGGTCT GCGGAGGGGG 001120
001121 CTGCATTGCC GGGAAGGACC ATCTGATTCT GGATTCCAGC CTCACCCTGG GCCACCGCTG AGTGTCCCAA GTGGCCCCTT 001200
001201 AGCCCCCAGG GCCAGGCGGC ATCCCAATCC CCTAGGGATG TCTGTGCTCA GAATGTGGCA CACACGCCCC GGCAGGGCCA 001280
001281 TCCTCCTCCT CCTGCACCCG CCACAGCCGT GGATTCGGGG TCTCTATCGT GGGCAGAAAT TCACACAGTC AAGGTGAGGG 001360
001361 TCCCAGGAGC AGCTGTGACC AGGCCCCGGC TGCCAGGGAG AGGGGGTCTT CAGCCGACGG GGCAGACACC CTGAGATGGA 001440
001441 CCCTTGTCCA GGGGAGGGCC CTGCCACCCA CAATTCCTTG GCATTCCTGC ACCAGCAGGA CGGGCTGAGG GAGGCGCCTC 001520
001521 ACCAGTGCCA GCGCCCAGCA TCACTGTGCC CCGGTGGAGG GGGAGGCCCT TCCGAGCCTG GGCCTGGgtg tggatgaggg 001600
001601 caggtctctc acctctctga cctcagcttc ctcaactggg aaggggggcc acagcacccc cttaggggtg atgaggaAGT 001680
001681 GGGAGCTCAG GGAGGACCCC GGGCAGGGCT GCCTCCTCAC CTCTCTTCGG CCTTTGGACA CTGGAGCTCA GAGGACCAAG 001760
001761 TGAATGAATG AATGACTCGA TCAATCAACT GATCCATGAA TCCATGGACC CCTGAACAGC TGGACAGCTG GGCTGTGGGC 001840
001841 AGGACAGGGG ACTCTGGCTG AAGCCGCGTT CATATGTGTT CAGCTTTAGG CCTCCACTGT GCCCGGACCA GCGGCCCACT 001920
001921 CAGTGAGTCG AGTGTGCACC TGGCACCCCT CTTTCTGGAA ATCCACGAAC AATGGGCTCC CAGCAGAGGA CTGAGGCTGA 002000
002001 GCAGGCCACT TCCCTGGAGC TGACCCCACA GCTGTGTAGG TACAGGGTGG CCGTGAACAC TTAGGGCTCT CTCGGGCTGT 002080
002081 GCGCTTCTTG TTCACTGCAA GGAGCAGGGT GTTGGCTCCT GACCAAGCCC TGTCACTGCT GCCCAGCCAC ACGTGGGGCC 002160
002161 CCTTCACCCA CCCCTGACCA CCTCATGCAg gtgaagccac tgtggaaaca gcctggcagt cccttgaaaa atgaagtcat 002240
002241 aaaccccagc aattgcactc ctgggcCTCT GACAGAGCTT GCACgtcccc tccaaagctc gtgttaagct gtgagcccca 002320
002321 gtgccggagg tggggcctgg tgtgtttggg ttctgggggt ggatccctca tggctgggtg ccatgaaccc actcaccaca 002400
002401 gtgagttctc acgagatctg gttgttgaga agtgtgtcat acctccccca caactctctg tcttttgttc cggctctggc 002480
002481 aatgtaacaa gcctgctcct ccttcgcctt ctgccatgac tgtaagcttt ctgagggctg accagaagcc cagcagatgc 002560
002561 cagcaccatg cttcctatac agcctgcaga accgtgagcc agctaaacct ctcctcataa atcaccgagc cccaggttta 002640
002641 tctttacagc aatgcaagac ctgactaata caGCACCAGC TCCCCAaaat aaaaagaaat attcaaacaa ataagcgcac 002720
002721 agaagtgttc ccagcagcac tattcacagc agccaaaagg cggaggagcc acaggcttgt cagctgatga cagataaaga 002800
002801 aagcatggcc tgtcatccca gcactttggg aggccgaggt gggtggatca cctgaggttg ggagttcaag accagcctgg 002880
002881 ccaacatggt gaaacccagt ctctactaaa aatataaaaa ttagctgggt gtgatgatga gc
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Predicted Small Protein

Name NONHSAT080753_smProtein_566:739
Length 58
Molecular weight 5963.5553
Aromaticity 0.0526315789474
Instability index 52.3456140351
Isoelectric point 5.62481689453
Runs 9
Runs residual 0.00394736842105
Runs probability 0.0245932206717
Amino acid sequence MTLQEAHVAGAVWDSGGERKCTAQGMWRQAQRQAWGPEGAAGEQGAGPGVPPCRSEI
Secondary structure LLHHHHHHLLEEELLLLLEEELHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -