NONHSAT079928
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT079928 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
549 nt |
Genomic location |
chr20+:43595180..43603045 |
Exon number |
4 |
Exons |
43595180..43595244,43600719..43600799,43601848..43602074,43602870..43603045 |
Genome context |
|
Sequence |
000001 GAGCGGGTCT GGGCGGCTGC TGGCAGCGCC ATGGAGACGG TACAGCTGAG GAACCCGCCG CGCCGGCAGC TGAAAAAGTT 000080
000081 GGATGAAGAT AGTTTAACCA AACAACCAGA AGAAGTATTT GATGTCTTAG AGAAACTTGG AGAAGGATTT ACAACGTTAA 000160 000161 ACCCAATCCT GGATTACATG AAATGGTTTT TTTATGATTT ACCTCCTTGT AAAAAACATG AGTCATCGTC TTTTTGTAAG 000240 000241 TTGGAAAAAT ACTCTTTGGA ATCCAGCAAG AAATCAAGCA GAGAAGGGAA GTAAAAATGA CACACCAGCT GTGCTGTGAA 000320 000321 AAGACAAGTC CAAGATGAAT CTGAAGACTG CCAGTTGACT GGCATCATTA AAGATCTATG GATGTCTTCT GCAAGGAATG 000400 000401 TGGAAATTTC CCTATGAAGA TATCACCAGG GAGAAAACAA AGCTTCAGAT CTTTCTTCCC ATACTATCAC CTTATTGTTC 000480 000481 TTCTAAATAA TACCAGATTT CTGGTATTTC TTGGATTTCT GTTATTCTGA CTGAATGAAC CTAAGCAAG |
Predicted Small Protein
Name | NONHSAT079928_smProtein_377:529 |
Length | 51 |
Molecular weight | 5983.1021 |
Aromaticity | 0.22 |
Instability index | 51.014 |
Isoelectric point | 9.58990478516 |
Runs | 9 |
Runs residual | 0.0153216374269 |
Runs probability | 0.0311782370606 |
Amino acid sequence | MDVFCKECGNFPMKISPGRKQSFRSFFPYYHLIVLLNNTRFLVFLGFLLF |
Secondary structure | LLEEELLLLLLLLLLLLLLLLLHHHHLLEEEEEEELLLLHHHHHHHHHHL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTToo |