NONHSAT079920

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT079920

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2418 nt

Genomic location

chr20+:43514344..43537160

Exon number

3

Exons

43514344..43514527,43534642..43534737,43535023..43537160

Genome context

Sequence
000001 GCGGAAGTGG AGCTAccgcc accgccgccg ccgattccgg agccggggta gtcgccgccg ccgccgccgc tgcagccact 000080
000081 gcaggcaccg ctgccgccgc cTGAGTAGTG GGCTTAGGAA GGAAGAGGTC ATCTCGCTCG GAGCTTCGCT CGGAAGGGTC 000160
000161 TTTGTTCCCT GCAGCCCTCC CACGGCATTT GATGAAGCAA TTGCTGAATT GGATACGCTG AATGAAGAGT CTTATAAAGA 000240
000241 CAGCACTCTG ATCATGCAGT TACTTAGGGA CAATCTCACT CTGTGGACAT CGGAAAACCA GGGAGACGAA GGAGACGCTG 000320
000321 GGGAGGGAGA GAACTAATGT TTCTCGTGCT TTGTGATCTG TTCAGTGTCA CTCTGTACCC TCAACATATA TCCCTTGTGC 000400
000401 GATaaaaaaa aaaaaaaaaa aaaaaagaga aTCGTACGTC GACTTTCGAT TTTTCACAGC CTCAGCCTAG GAAAAATGGT 000480
000481 TCATGGGATA AACAGCTGGT ATTTGTATCT AAAACTCAGA TTGGTCACAT AAATGCCACG GCATTCCGAA GTTTTGATTT 000560
000561 TGATTAACAT TGACAGGATT ACTGTGTGTT TAATTTTTTA AAAACTGAAC ACTGTGATTA TGGGGTTTTG TAATTTAGCA 000640
000641 GAACTCTTAC TGGTAGAAAA AATAGACCTG AATTATGTGT AACTTTTTGG AAGGTTTAAT CTGATATCAA AATAATCATT 000720
000721 GAAATACAAT TCCATTGTAA AGTTGTACAG AAAGTTATAG AGATTATATT GTGATGCTGG AACTTGGAGT GAGACACACA 000800
000801 TCATTTGGCA TTTGAGTTGA ATGGTAATTC ACAGTAATGC TGCCGTTGTT CGGGACTTAA AGACACTTGA CCTGTTTGGG 000880
000881 CTGTTGCCAC TTAAAAGTTC ATGACCACAA ATGTCCACAG TGTCTTCCTC TGAGGAAACT CGAATCCTGA AATGGAAATT 000960
000961 CTTTGTGGCA GATAACTGGC TTATGACACC TTGAAAAGTT CAAGTGCTCA TATAACACAC CACACTGAAC CCCCTTTCCT 001040
001041 ACAGCAATAT GTTCACTATG TTACCAATTT GCAACTTGTG CTTCAATAGT GGAATCTACT TTCATTGTTA ACACTGAGCT 001120
001121 AAAGAAAAAA AGCCGTGTGT TTTATGAATG ACCTTATCTG TTTCCTGGAT AATACCTTTA AGAATAATGT CCTGAgtcag 001200
001201 gcgtggtggt gcgtgcatct agtcccaact atttgggagg ctgaggcagg aggatcgctt gagcccagga gtttaaagct 001280
001281 gcagtgccct gtggttgcac ctgtgaataa ctgcactcca gcctgggcaa catagcgaga cctcatctcc aaaaaagaaa 001360
001361 acaaaaaaca aaaaaaGGAA TGATGTTCTG TAGAGATGGC CTTTCACTTG AGGAGTACTC AGTTTTCAGG TTCTTCCTAG 001440
001441 CTCGGGGCTT TTAAATTTTG AAATCTAAAC ATTCTTTCCC ACCATCCTTT TTGACTGTTG ACCTTGGTTT TCTCTTCTAA 001520
001521 GTTTCTGTCC CTCTGCTTCC TTACTTTTTT TCCTTTTTGA ATTCTATCTT TATCTGTCTT TTGTTCACTT TTTAATGCTA 001600
001601 TATATGGGCA GGGGTGAGAG ACATTACTGA GCACCTTGGT GAGCAAGCCT GGCTTTAAAG ATTGGAGAAG AGCTTCTGGC 001680
001681 ACCAGAACCC TGTCTTCCTC CAGTTCTCAA CACGGTGTTG CTCTTCAGTC ATACCGGAAT CTGAATCAAA AAAGTATTTT 001760
001761 TAAATATCCA TGATTTCTCC CTGTATTGAG GCTAGCCCTG ATCATGCTTT TTGTGCCTGT CACCAGGTCT CCCAAGTGCA 001840
001841 CTCATCCAGG TCAGTGCTCA GATGTGTTTA AGGAGACCCT ATATTCAGGG AAGTTGCGTG AACACTGCAG TGGGGAGAAT 001920
001921 TGAGAATAGT CAGGCCTATC AGTCTCACAG AATCACCCCT CTACCTTTGA TATTCCACTT AGCTGTAGAG TCCATCTGTT 002000
002001 TGTCCATCTG CTGAAATGAG AAAAGAAAAA TTTATGCACT GATTTAAAAC AAACCaaaaa aaaagaaaaa aacaaaaaaa 002080
002081 aaaaTCCCTC CTTTCTAGCT GAACAAAAAT GTGCAGTTAA TACTTGGCGC TTGAAAATGC AGTAGTGAAT GTGGAACCAA 002160
002161 GCCTGTCTGT ATATCTGGTA GCTCTTTTCT TGCTTTGTTT TTTCTTACCA GTATTCTGCC TAACGTTTGC TTCTGTGATG 002240
002241 GTTATATTGC CTAGCAAGCA CACCCGTGGT TGTGAAAATA GTATAGCAAA AAAGAAAAAT CCCCGGTTAT TGATGTACTA 002320
002321 GATTTGTGTA TGTCTTTTAA ACAGTTCTAG TTTCACCTTA CACAGAATAA TCAGGAAAAG TGTAAAAATT CAAAAGTGAA 002400
002401 ATAAAAATTT TATCAGTT
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Predicted Small Protein

Name NONHSAT079920_smProtein_1769:1870
Length 34
Molecular weight 3599.1305
Aromaticity 0.030303030303
Instability index 98.0727272727
Isoelectric point 6.79229736328
Runs 7
Runs residual 0.0279973649539
Runs probability 0.0327806798395
Amino acid sequence MISPCIEASPDHAFCACHQVSQVHSSRSVLRCV
Secondary structure LLLLLLLLLLLHHHHLLLEEEEEELLLLEEEEL
PRMN -
PiMo -