NONHSAT079895

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT079895

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

726 nt

Genomic location

chr20-:43285092..43300311

Exon number

3

Exons

43285092..43285692,43297225..43297317,43300280..43300311

Genome context

Sequence
000001 agcgagctga ggaggagcag tctgggaaga agagacaagg tctcactatg ttgccctggc tggtctgtaa ctcctggcct 000080
000081 caagcagtcc tcttatctca gctttccaaa gtgctgggat tacagGAGTG GCGTGCTGTG TGGATAATGA ATATTGGGGA 000160
000161 AGGCATCTCT CTCCAGCCCC TCTCAAGCTT TCTGTAGTCA CTGGTCCACT CTGTATTGCT ATGAAGAAGC TCAAGACCAG 000240
000241 CCtgtatcac tcggggtcct ggcaggaacc aggtgccaca ctcaaactga gtaattgaag agggtttaat atgggagtta 000320
000321 tttacatagg tgtgggctgg TGTAGCTGCC CATATGCCCT CAAAATCACC TCTACATGGC AATAGCTACT TACTGCTAAC 000400
000401 AGAGTCTCTC TCTCATTGCT GCAAATATTT TCTAGCCATG CAAGAAACTC AGCCGGTCAT GTTGAACAAA CTAAGagtgc 000480
000481 caggaagtta atgtcctgga agcattgcca gaggggaggg ggcagttaga ttccccagct tcctcgctcc tctgctgggt 000560
000561 taagcctgca acatattcat catctcccag agtgctgccc agggatagag ctccaggtgc tcagtgtggt gacctgctca 000640
000641 tgtcagcttc ttcccctttc ctgtcttgtt tcgcacccac atccttccca tgtttcctct tcccaaataa actacttgca 000720
000721 ttgaaa
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Predicted Small Protein

Name NONHSAT079895_smProtein_47:196
Length 50
Molecular weight 5553.5635
Aromaticity 0.102040816327
Instability index 49.512244898
Isoelectric point 5.89544677734
Runs 7
Runs residual 0.019194704909
Runs probability 0.036856183915
Amino acid sequence MLPWLVCNSWPQAVLLSQLSKVLGLQEWRAVWIMNIGEGISLQPLSSFL
Secondary structure LLLLEELLLLHHHHHHHHHHHHHLHHHHHHHHHHHLLLLLLLLLLLLLL
PRMN -
PiMo -