NONHSAT079895
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT079895 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
726 nt |
Genomic location |
chr20-:43285092..43300311 |
Exon number |
3 |
Exons |
43285092..43285692,43297225..43297317,43300280..43300311 |
Genome context |
|
Sequence |
000001 agcgagctga ggaggagcag tctgggaaga agagacaagg tctcactatg ttgccctggc tggtctgtaa ctcctggcct 000080
000081 caagcagtcc tcttatctca gctttccaaa gtgctgggat tacagGAGTG GCGTGCTGTG TGGATAATGA ATATTGGGGA 000160 000161 AGGCATCTCT CTCCAGCCCC TCTCAAGCTT TCTGTAGTCA CTGGTCCACT CTGTATTGCT ATGAAGAAGC TCAAGACCAG 000240 000241 CCtgtatcac tcggggtcct ggcaggaacc aggtgccaca ctcaaactga gtaattgaag agggtttaat atgggagtta 000320 000321 tttacatagg tgtgggctgg TGTAGCTGCC CATATGCCCT CAAAATCACC TCTACATGGC AATAGCTACT TACTGCTAAC 000400 000401 AGAGTCTCTC TCTCATTGCT GCAAATATTT TCTAGCCATG CAAGAAACTC AGCCGGTCAT GTTGAACAAA CTAAGagtgc 000480 000481 caggaagtta atgtcctgga agcattgcca gaggggaggg ggcagttaga ttccccagct tcctcgctcc tctgctgggt 000560 000561 taagcctgca acatattcat catctcccag agtgctgccc agggatagag ctccaggtgc tcagtgtggt gacctgctca 000640 000641 tgtcagcttc ttcccctttc ctgtcttgtt tcgcacccac atccttccca tgtttcctct tcccaaataa actacttgca 000720 000721 ttgaaa |
Predicted Small Protein
Name | NONHSAT079895_smProtein_47:196 |
Length | 50 |
Molecular weight | 5553.5635 |
Aromaticity | 0.102040816327 |
Instability index | 49.512244898 |
Isoelectric point | 5.89544677734 |
Runs | 7 |
Runs residual | 0.019194704909 |
Runs probability | 0.036856183915 |
Amino acid sequence | MLPWLVCNSWPQAVLLSQLSKVLGLQEWRAVWIMNIGEGISLQPLSSFL |
Secondary structure | LLLLEELLLLHHHHHHHHHHHHHLHHHHHHHHHHHLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |