NONHSAT079097

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT079097

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1099 nt

Genomic location

chr20+:24045119..24047430

Exon number

2

Exons

24045119..24045145,24046359..24047430

Genome context

Sequence
000001 tgggggctcc ccttgttcta cattatgGAT ATGATCCATG GATGCACAGA GGGCCTTTGT ACTTTGCTGG AGAAAAGCGT 000080
000081 GCACACTAGA CAGACTCATC TCCCATGGAA TCTGCTGACA GATCTCTCTG GGGACCCCTG GGCAGCTATG TGTCCAGCAC 000160
000161 CACCAGTGGC TCCCCATTTC TGTGTCTTCT TAGAAGATCT GACAACCCAG CATACCTCTT GCTGATGTTA TGGATCTGCT 000240
000241 GGCTCTGTAA ACTATAAATT GGCAAACTAG ATTAATCAAA GAGGAAGCTT TCTGCATGTG TGCTAACAGT CCCAACTCTC 000320
000321 TAATCTCACA AGGCACCAAT GTGACACTTC TTGCTAAAGA ATGTGGTTAT TAATATATCT GTCTTTGGTT TTCTTTTCTG 000400
000401 CTCTTGGAGT GGAAAGCCCC TAGAGAAATA GTTCCAAAAA GAATTTATAA TATACTTGCT GGAGAAATAA GATTTAAGAG 000480
000481 GGCAGGCTTT CACATCAAAG TTTCAGCATA TGGTAATGAA GGTTTCTGTT CAGACAGGTG GAGGAGGAGC TGCCTACATT 000560
000561 TCCTGCGGGG GGTGGAGGGG AAGTAGGCAT GGCGGTGAGT CCTGGGCTCT CAGACTTTGC TTATCATATT GTAACAGCTG 000640
000641 ACCTTGGTCC CCTTTTTGGC TCTGTCTCTA ACCCACAGGT CAGCCTAGGA TGTCACTGAT TCAATTTATT TCAATGTCAG 000720
000721 GTTGTCagat ataatttaca tacagtaaca ttccgttccc ccttttcagt atgcagctct atacgttgtg acaaatgtat 000800
000801 gccattctat aaccaccatg atgaagacac ggaacatttc catcacctca gaagttccct tgtgcccctt gtagtcagct 000880
000881 cctcttctca gacccacccc aagctggcaa ccacgggtct gctttctata cctatagttt tcctttttca aaatatcata 000960
000961 taaatagTCC ATAGGCATTT TAACAGCCAA GGTGCCTAAT AAATAGTGCA CTGTGACTAT CATTGTTTTT CTTGAATTAA 001040
001041 AAAGCCCACC GTGGAGGTGG GTACGTGGAG CCTCTCCTAA CTCCAGCTTC CATAAGCAG
[back to top]

Predicted Small Protein

Name NONHSAT079097_smProtein_104:256
Length 51
Molecular weight 5652.6104
Aromaticity 0.12
Instability index 79.854
Isoelectric point 7.71356201172
Runs 7
Runs residual 0.0246783625731
Runs probability 0.043795896737
Amino acid sequence MESADRSLWGPLGSYVSSTTSGSPFLCLLRRSDNPAYLLLMLWICWLCKL
Secondary structure LLLLLLLLLLLLLLEEELLLLLLLEEEEEELLLLHHHHHHHHHHHHHHHL
PRMN -
PiMo -