NONHSAT078883
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT078883 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
462 nt |
Genomic location |
chr20+:19870054..19916194 |
Exon number |
3 |
Exons |
19870054..19870302,19915743..19915843,19916083..19916194 |
Genome context |
|
Sequence |
000001 GGGCTGAAGG GAGATGTAAG GCCTTGGTGG GAAATAAATG GCACTGTGTT GTTGACGGAA AAAGATCTTG GCAGGACTGT 000080
000081 TGTTGTGAGT GTTCTGTGGC TTAGAAAGGA ATTTCCTACA GGCTGGACTA ACCATTAAAA ATGTCTCTAC CTTCAGGAGT 000160 000161 CCCCGGCGTG CAGTGGAGCC TCGCTGGGGG AAATGACAGC TTGGACCATG GGCGCCCGCG GTCTGGACAA GCGAGGAAGT 000240 000241 TTCTTTAAGC TCATTGACAC AATTGCCTCG GAGATCGGAG AACTGAAACA GGAGATGGTG CGGACAGATG TCAACCTGGA 000320 000321 AAATGGCCTG GAACCCGCTG AAACCCACAG AACCCGGAAA CCTAAAATTG TCTGTGCCAT ATCCACCTAC TCCCAATGAT 000400 000401 GGAAACAGTA ATGCAGCAAG ATCCAGCGTG TGCAAAGTAG AATTCAGTGT AGCCGTGTGA GT |
Predicted Small Protein
Name | NONHSAT078883_smProtein_140:247 |
Length | 36 |
Molecular weight | 3679.0876 |
Aromaticity | 0.0571428571429 |
Instability index | 58.32 |
Isoelectric point | 10.7366333008 |
Runs | 5 |
Runs residual | 0.0382566585956 |
Runs probability | 0.02231054584 |
Amino acid sequence | MSLPSGVPGVQWSLAGGNDSLDHGRPRSGQARKFL |
Secondary structure | LLLLLLLLLLEEELLLLLLLLLLLLLLLHHHHLLL |
PRMN | - |
PiMo | - |