NONHSAT078794

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT078794

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

400 nt

Genomic location

chr20+:17988137..17999652

Exon number

2

Exons

17988137..17988368,17999485..17999652

Genome context

Sequence
000001 ATCATTTGCT TATCTCTCAT GATTCTGTGG ACTAACTGGG CTCAGCTCGG CAGTACTTTT GTTCTATGCA GATTTTCTCT 000080
000081 GCAGCTACAG TCCACTGGCG CTTGGCCAGG CTGGAACGGC CGGGATGCCT CACTTACATG TTTGGTGTCC TGGCAGGGAT 000160
000161 GGCTGGGGGG ATGGGCTCAG TGGGGGTGTT TGGTCAACTG GGCTCCCCTT CCAGGTAGTC TCAGCACCTT TCAGGCTAGA 000240
000241 GTGGACATCA GTTGACTTTG CCTGCCATGG TAGAGACTTT CAGTCATCCA CCATAATCCA TCCCCATTCT GCTGCACAGA 000320
000321 AGTATTGTGG CTGAGACACC TGCTTTTCTC CACCCCTCTA GTTAATGTGA CTAAATTCTC CCTATGGAAT GGGAATGGAA 000400
[back to top]

Predicted Small Protein

Name NONHSAT078794_smProtein_65:217
Length 51
Molecular weight 5273.1694
Aromaticity 0.1
Instability index 43.938
Isoelectric point 10.6939086914
Runs 10
Runs residual 0.0353216374269
Runs probability 0.0389683801449
Amino acid sequence MQIFSAATVHWRLARLERPGCLTYMFGVLAGMAGGMGSVGVFGQLGSPSR
Secondary structure LLEEEHHHHHHHHHHHLLLLLLHHHHHHHHHHHLLLLEELEEEELLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooo