NONHSAT078312

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT078312

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2666 nt

Genomic location

chr20+:5175867..5178532

Exon number

1

Exons

5175867..5178532

Genome context

Sequence
000001 GCTCAGCTGG TAGTTTGACC TCCGTTGGTG CAATGCCAGA GATGGGATTG TCAGCCACCA CACTGCCACC ACCCTGCACA 000080
000081 CAGTCTGGGT CCCTCCGAGA GAAGCACGCC AACCTTAACA TCCCCTACAG CATCTTGGTG CTTCACACAC CATTTAGGAG 000160
000161 GCCACCCTAA CGAGGCAAGA GGACATGGGG GTGTGCAGAA GTTCTGTTCT TAGTGAGAAT GGCTGGCCTG AGAATCCAGC 000240
000241 TCACCTCCTC TGCCCACAGT CTGGACTGCT TGTGGGAAGG CCATCTCCTC CTGTCTGGTG GTACCTCCAC TCTGGGCAGG 000320
000321 GAGGGCCTGT CTGTGACTCG CTCTGGACCC CACTTCCCGC TCTGGCCAAG GGCTGTCTTC TGTGCACATA GCTCAGGAGC 000400
000401 CTGCAGCAGT TCCCTGTATG GGTGGATGTC CTCAGGGGCC AAGAAGAGAA GAATGGGGAC AACAGAAACC TGCTTTGTAG 000480
000481 GGGATTATGT AGACTAAAAG CCTAGAAGTT CTGCCCACAT CCTTATGACG CAGCCAATCT GGAGCTTCAT GTTTCCTTCT 000560
000561 AAAAGTAGTA ACCGGGTAGA AGTGGGTGAC CCATTGAGGA CACATGATGT GAGGTATTTC TGCCGGATTC TAGGTTAGCA 000640
000641 AAGACTCAAA TGGGTGACTC ATGAATGAAG GGAGAACAGG CACAGGACTT AATGAAAAGA GTTTCTTGAA CTTAGTTTTC 000720
000721 TGAATGGGGG TGGGGAGTTG GGGCACGTGT GTGTAAGGGG AGGCTGCCTC ACTTTGAAGG AATGGTGTTG GCTAACAGGA 000800
000801 TCCATGAAAT TCCTAGGTCA GTTGAATAAT AACTGAACTA CTGGTTTGAC TGTGGATTAT TTCCTGGGTA TTAGTGGGAC 000880
000881 CCAACAGCAC ATTGCTATTA ATAGTATGGA AATAATGGTC CCTCTGTTTC ATTGAATTGC TGAAGTAATG ATAATGCCAT 000960
000961 GAACCAGGAG AAGATGGTTG TGGGGGTTTC TAGGAAGCAG CTGCTGTGAC AGGCCAATCC CAGGCTTGCC CCCGAGCCCT 001040
001041 CCTGTCCTTC TGGGTTTGTG TTTGCCTTGC CTGGTGCTTC CTCCCTCATT GTGTTGTTGA ATAGACCTAG GCAGCCTTGT 001120
001121 ATCCATAGAA AGCCTCCACT GCTGGGCCGG GGAGGGGGTT GTGGTAAGGG CCCTCTGGAA ATCAAGCAGA GAATGCCTTT 001200
001201 GCAGTGGTCT CCCGGGCATT GGGCAGGGCC TAGCCTTTTG CAGCCCCCAG AGGACCTTGC CTGCATAAAG CACTCAGAAG 001280
001281 GGTTAGCCAC CTGGTGATTT TGTCTCTAGT GAAACTGTGT TTGCCGATAA TCATCCACAT AGCCACCTCT GTCCTCGCAG 001360
001361 TTTGGATGCC TTTTTTTGAC ACCTGCGCTA GGTTCTTGTA TGCTGGCTTT TCTTAAAGGA ACAGCAGAGT AGAAAAGAGG 001440
001441 TTGAGAATGT TTTCTAGCAG GCAGAATGTG CATACATGTT TTCATGAGTG TCCTTTGGGT GCTGTTTCTT TTAAATCCTC 001520
001521 TGTGCACAGG GCTCTGGCCT TTAGTAAACT GTTTTTCTGT CTTACGTCAT GCTGACTGGG TGCTAGGGGC TGATTACAAA 001600
001601 GGGGAAGAGT TGAACAGACA TCAGGGGCCG ATGAAACCAA AGGACTAGGA GTCAGGAGAA CAAGTCAGGG ATTAGGAGAC 001680
001681 AGCGGTTTGG TTTATTGTTA TCCAGCTGGA GGACTCCTAG GGGCAGCAGC AGGAGGAATA CCAGGGCCAC GGAGGGGCCA 001760
001761 GGAGTCTCAC AGTGGAGGGC AGACTCTAAC AGATGCCAGC TGAACGCTCG CTGGCCCTGG ATGTCATACG AGTTGGGGAC 001840
001841 CAGAAATCTG GGCTCAGAGA ACCCGTCCAG GGAGATTTGA AGCCATGGGT TATCTTCTAG AGTTGATACT GATAATATAT 001920
001921 TTTAATTTTT ATTGATGTTT AATACCTTCT GAAACAGGAG GGTAAGATCA GATGGGAAGC CCCTCTGTTG AAGGATCTTG 002000
002001 GGAACCTTGG TGGTTTTTTT TTTTTTTTTG GTTTTTTTTT TTTGATCGAG CTGTGGACAT CCTTCTTAAT TCGATTCTGA 002080
002081 GGATTTGTTT AACTAAAAAG TTCCCAAACA CAGAAAGGGC CTCCCCACCT GCTTTGGGGA GCTGTCTGTG CTGGGAGTGC 002160
002161 CAGGCATCCC ATGGGACCCA TCACTGCCAG TGTCTGTGCC TCCCAGAGGT CAGCCGTGTC TGCCCTGGCT CTGTCTCCTC 002240
002241 TGTGACAGGG CAGAGCATTT CTGGTCAGTT TCTCCATGGT GCCTCCCACC CCTTTGTAAA GTGGATGGAC ATGATGGAAT 002320
002321 TCAGTTGTCT CACCCTGATA GCCTGGGTGT TGATATTCAC TTTACCCGCA CTCAGACACA GGCGACCTTG AAGCAGTTCT 002400
002401 CGGTGTGTAG AGTCCACGTG ACAGTCCCCA CAGCCTCCCC AGATAGCTGT GTGCCTGTGC GCTACTGCTG TGCCATTTTC 002480
002481 CCAACTTGGC GTTTCACTAA ATGCAGCTGA TCTCTCTCTC TGTGCACTCG TGATCCATGT TGAACAATAC ATGTAGGTTC 002560
002561 TTTTTCCACG CAATGTAAGA ACATGATATA CTGTACGTTG GAAAGCATTT ACCTTATTTA TATACCTGAA TGTTCCTACT 002640
002641 ACACAAATAA ACATATATTA AATTCT
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Predicted Small Protein

Name NONHSAT078312_smProtein_218:496
Length 93
Molecular weight 9837.0751
Aromaticity 0.0869565217391
Instability index 52.6902173913
Isoelectric point 8.47918701172
Runs 17
Runs residual 0.0495777291211
Runs probability 0.0467179982752
Amino acid sequence MAGLRIQLTSSAHSLDCLWEGHLLLSGGTSTLGREGLSVTRSGPHFPLWPRAVFCAHSSG
ACSSSLYGWMSSGAKKRRMGTTETCFVGDYVD
Secondary structure LLLEEEEELLLLLLHHHHHHLEEEELLLLLLLLLLLEEEELLLLLLLLLLLEEEEELLLL
LLLLLLEEEELLLLEEELLLLEEEEEEEEEEL
PRMN -
PiMo -