NONHSAT078137
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT078137 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
456 nt |
Genomic location |
chr20-:1768625..1798306 |
Exon number |
4 |
Exons |
1768625..1768754,1784626..1784738,1791200..1791320,1798215..1798306 |
Genome context |
|
Sequence |
000001 TGCTGTGTAC CTGGAGACCC CCAGGTCTCC AGGGGTCAAA CCACACCCCA CAGGCACCTT GGAAGAAGAA ATCCACAGGA 000080
000081 GGAAAAAAAG AAgatttgct gagcacctac tatgcatcag acgctgtgtt ctaggcaagg gggatacacc tgatggaaga 000160 000161 aggtccttcc ctagacgtag ctaacatccc agtgtgggag atgacacgaa acaGCAAACT CCCCACAACA GCCTCCTCAA 000240 000241 CGCTGCCTCC CACAGTGCTT GGACAAAATA ATTACAGCAA GATGCGGGCA CTGAGCTGAC TCCTTATGTA GGACATCCCA 000320 000321 GTGCAGATGT GCCCCACCTA AGTGCTGACA GCCTAAAAGT CCACCATTAA AGCCATTCTT CGGGTTTAAG GCATTGATCT 000400 000401 TCACCATCAT CTCCCATTAT TATATCTGCT TGCTCTCATG GAGACAGGGG TCACTG |
Predicted Small Protein
Name | NONHSAT078137_smProtein_152:298 |
Length | 49 |
Molecular weight | 5233.9056 |
Aromaticity | 0.0416666666667 |
Instability index | 54.6354166667 |
Isoelectric point | 6.01385498047 |
Runs | 8 |
Runs residual | 0.00109649122807 |
Runs probability | 0.0172451863628 |
Amino acid sequence | MEEGPSLDVANIPVWEMTRNSKLPTTASSTLPPTVLGQNNYSKMRALS |
Secondary structure | LLLLLLLLLLLLLEEEELLLLLLLLLLLLLLLLLEELLLLHHHHEELL |
PRMN | - |
PiMo | - |