NONHSAT078056

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT078056

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

2593 nt

Genomic location

chr20-:324777..327369

Exon number

1

Exons

324777..327369

Genome context

Sequence
000001 CACAGGCTCC CATCTGTCTC CGGGCTCCTA CCGGGAAGTC CCCTCCCACT TGCCTTGAGA GCCGCTAATC CCTCTGGAGT 000080
000081 CCTCACATCT CACTCAGTCC CCATCCTCTT TTCATCCTCT TTTCCTCTTT GAGTCCCTAC CCATCCCTGG TACGGGATCA 000160
000161 GCCCTTGTAC CTTGAGAAGG GAGTTTGGGT GGAGGACTCG GGGTTGGGAG AGAAGTGACC TCCACTTTGG AAGGAGCTAA 000240
000241 TGACAGCCTC CCTTGTTGTT TCCTCCCCTA GCCCCAGTTC TGCCCTGGGC AATGCGTGCC CACTGCCCAT CTCCCTGGAG 000320
000321 AGCCAGCCTG TGCCAGGCAG CTGCATCTGC CTCCCACCCT GTCATGAGCT GTCagccttg attttgtccc acatttgctg 000400
000401 tgtgatcttg ggaaagtcat tgtgcccctc caaccgtcaT CAAGCACCCT TGCACAGACA TGCCTTTGTG TCTtgagcat 000480
000481 ctattctgtt tctccttgtg ctaggggctg gggacacaca gaagaatgag CTCGGCAAGA TAGGGCCACA TCTTCCTTTT 000560
000561 TAGTTTTTCt ttttcttttt ttttaatttt tatttttttg agacagcgtc tcactctgtt gtccaggctg gagtgcggtg 000640
000641 gcatgatcac ggctcactgc agcctcgatc tcccaaggct caggtgatcc tcccacctca gtcgcctgag gagctgggac 000720
000721 tacaggcacg cactaccatg cctagctaat tttttgtatt tttaatagag acagggtttt gccatgatgc ccaggctggt 000800
000801 cttgaactcc tgagctcaag tgatccacct gcctcggcct cccaaagtgc tgggattgta agcgtgagcc accgcgtctg 000880
000881 gccAAGGCCA CATATTtctt gttcgtgttg tatctgtgag cctcccatag tgcttggcac tgagtaggca gcccagtaaa 000960
000961 tatttactga aGACAGTCTA ATaatagtag caaacttatt atgctcacta tgtgcaaagt gtttaagcgt tttgtatgtt 001040
001041 ctatttactt actcatttaa gtgtgtgtgt gtgtgtgtat gtgtgtgtgt gtgATGGGAG GAACTCTTGC AGCTCAAAAC 001120
001121 TAAAGGCCCC AAATGgtgac aggagatggc attggagagg caggcagaag tgagaccttg tggggcctca taagccaagg 001200
001201 taaggagttt gagcttcagc ccaagggtag tggggagcca tggaagggtt atgaagaggg gtgggatgtg atctgatttt 001280
001281 cattctgaaa agacctctgg ctgctgtcaa gagaacagca tgttgagcac aagagtgaca gcaagagatc agcaaagaga 001360
001361 tcagagatga cagtgtcttg gcctggtgca gagaaatgaa gACATTCAAG AGATGTTAGC CTGTAAAATG AACTACAGGa 001440
001441 atagctacag attggaaaca acctgtggtg gttttaaaat atagctacaa attctttagc actcctctgt agagaggtgg 001520
001521 gatccttgta ccctctctga atcttgggtg agctgatgac tgcttcaacc aatggagtac ggtggaagta acactctgac 001600
001601 ttctaaggtc cagacataaa agtacaggca acttctgcta gaactctagc tcttggagcc tgaggcacca tgcctaccta 001680
001681 gggctccatg tctgcttaga ggctgccatg ctgtcaggat gccaagacca tcaggagagg acacatgaag gcaccacagt 001760
001761 cccagctaag cttagctttg agtcatccca gttcaagcat aaaagaagtg agtgaagaag aaccagatga ggccaggcac 001840
001841 ggtggctcac acctgtaatc ccagcacttt gggaggccaa ggcgggtgga taccctgagt tcaggagttc gagaccagcc 001920
001921 tggccacatg gcaaaacccc gtctctacta aaaatacaaa aatagccggg catggtggcg tgcacctgta atcccagcta 002000
002001 ctagggagga tgaggcagga gaattgcttg aacccgggag gcagaggttg cagtgagccg acatcatgcc attgcactgt 002080
002081 agaaggcgaa ggggaagggg aagaacaaga tgattccagt ggccagccat ttgaatcagc ttcagccttc aaatcttcaa 002160
002161 atcttcctag ctgaagactc aaacattgca gagtagaaac aagctggcct cactgtgtcc tgcctgaatt cctgacacac 002240
002241 agaacccaca agcatattca agtggttatt gtgttatacc actaggtttg gggggttttg ttctgtgcta acagataact 002320
002321 gggacaccac ttaaatatcc atcaatggaa gacgagttat gtacattata tgtctttgtg gaatactatg catccattag 002400
002401 aaagaagaaa ttagtctata attatttata ttaatcacac ttcaagtgaa gaaggatgca gtgttctgaa aagtcttgat 002480
002481 agtatgcctc catttgAAAT TCTCAAAAAG ATGGCACATA TAGAGAACTT CTGGGAAAAT AGACAAGAAA GAGGTAACAG 002560
002561 TAGATGCCTT GGGGGAGGGT AACTGATGGC AAG
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Predicted Small Protein

Name NONHSAT078056_smProtein_239:475
Length 79
Molecular weight 8082.4532
Aromaticity 0.0128205128205
Instability index 88.1384615385
Isoelectric point 7.63812255859
Runs 15
Runs residual 0.0586303939962
Runs probability 0.0625978920097
Amino acid sequence MTASLVVSSPSPSSALGNACPLPISLESQPVPGSCICLPPCHELSALILSHICCVILGKS
LCPSNRHQAPLHRHAFVS
Secondary structure LEEEEEELLLLLHHHLLLLLLLLLEEELLLLLLLEEELLLLLHHHHHHHHLEEEEEELLL
LLLLLLLLLLHHHLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLL
LLLLLLLLLLLLLLLLLL
PiMo ooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTii
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