NONHSAT077946
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT077946 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
455 nt |
Genomic location |
chr2-:242486081..242488317 |
Exon number |
2 |
Exons |
242486081..242486488,242488271..242488317 |
Genome context |
|
Sequence |
000001 TGTCATCTCT TATCTCTCTG AGGATTGTCA TGTTAGGGAC CTTTTTGttc ctgaggctgg aagtccagaa gtcggggtgc 000080
000081 tggcaggacg tgctcttctg aagcctccag ggcagggcca gccgcatgcc cgtctcctcg cttgggcacc tgccagcggt 000160 000161 ccccggcggt ccccggctca ttgctgcatg gctccaacgt ccgcctctcc caccatgtgg cctcctcctg gtgtctctgt 000240 000241 gtccaaatct cccgctctgt ctaaggataa cagtcactgg tcatgggacc catcctaatc cagggtgacc tcgtattaac 000320 000321 ctcatcacat ctgcaaagac tatttccaag tcaagccaca ctcccagctg ctgggggcgg gacttgaaca tattttttgt 000400 000401 ggggacacaa ttcCCCTCTC AGGTTTTAAG ATTTGTCTTT ATCATTAAAG TTTTC |
Predicted Small Protein
Name | NONHSAT077946_smProtein_125:307 |
Length | 61 |
Molecular weight | 6204.4085 |
Aromaticity | 0.0166666666667 |
Instability index | 58.9866666667 |
Isoelectric point | 9.30133056641 |
Runs | 7 |
Runs residual | 0.0330673758865 |
Runs probability | 0.10491584021 |
Amino acid sequence | MPVSSLGHLPAVPGGPRLIAAWLQRPPLPPCGLLLVSLCPNLPLCLRITVTGHGTHPNPG |
Secondary structure | LLLLLLLLLLLLLLLHHHHHHHHLLLLLLLLEEEEEEELLLLLLEEEEEEELLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiii |