NONHSAT077535
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT077535 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1811 nt |
Genomic location |
chr2-:235361543..235363353 |
Exon number |
1 |
Exons |
235361543..235363353 |
Genome context |
|
Sequence |
000001 TCTGAGACCT GGGTAGCAGC ACGTCGATGG GTTGGTTTTG TTTCCTCTTC ATTGAAGGTG GTGAGTTTCA AAGATATCAG 000080
000081 CTTTATATAA AGCTCTCCGT TCCAACCCTA CCCCAAACTT CCTCTCCTGT CTTCATGTGG ATGCTAACTT AAAACTCTTA 000160 000161 TTTCTGGGTC AGATAACTCC CTGCTCTCAG CCCTGATGAC TACACCTTTG ACACACACTA TATTGGTATG GCTTTTAATT 000240 000241 TTCTCTTTGT TTCTAGCATT TGAGAATCTC TGTCTTTGTT AATTCAACTA TGTATTTTTA AATAAACTTC ATATTTTAGC 000320 000321 TAACACTTGT AGATATTTGT AGCTGGGGAA AACTAACTTT AGTTGATTCT ACTGAGTAGA CAGGACTGGA AATCCATTCT 000400 000401 CTGGGGTTTG TTAAAACCAA AGTAACTGGC TCTCCTGGAT GCTAGCTCAC TGTCCAAGTT GAATTTAGTG TCAATCATCC 000480 000481 AGAAAATGTC CCGTTTTTCA TGTGCGAAGT CTGCTTATAG TTAATAGACC AGCTTAGGTT CTTCATTTAG TTCAGTGAAC 000560 000561 TCTTCAAAAT GTGGTTTCAA TATTGAAATA AATGCATATC ATTCTAATTT TACTCTTTTC TCTCTCTGCT AGGAAACTGG 000640 000641 AGGGAGTAAA TCCTACAGAC AATAGACAAA TGTTTGAAAT ACTTAGAACA TGGTTTGTTT TTCTTTTTGT TTTTGTTCTG 000720 000721 AAATGGAGTA TTGCTCTGTT GCCCAGGCTG GAGTGCAGTG GTACGATCTT GGGTCGCCAC AACCTCCACC TCCCAGGTTT 000800 000801 CAGCAATTCT CCTGCCTCAG CCTCCCGAGT AGCTGGGACT ACAGACACGT GCCACCATGC CTGGCTAATT TTTTGTATTT 000880 000881 TTAGTAGAGA CAGAGTTTCA CTGTGTTGGC CAAGACAGTC TTGATCTTTT GACCTCATGA TCTTCCCATC TTGGCCTCCC 000960 000961 AAAGTGCTGG GATTACAGGC ATGAGCCACT GTGCCCGGCC AGTTGTTTTA ATTCTAGGTT CTGGATACAT GGGAAGTGGA 001040 001041 GGAAATGCTG GACAAGAAGG CACAGTTAGA TGGTAGACCC ACCTCTGTCA ATAACCAGGC CCAGTTTTAA CTCATTGTTT 001120 001121 TTCAATTGTA AAATAAGAGT GTTGGACAAA ATACCTTATA GGCTCCTTCT AGCTCTTAGG TGATTTATAA AGGTTTGGGG 001200 001201 TGAGGGTAAA CTGGGCGGTT AAAGTCTGTG TAATCTGAAA GCCATGCAGG GGCTCTGACG GGCTTACCCC TGTCCCTGCA 001280 001281 GCCAAGTCCT GACGTGCTAC TTTCCCAGGG CTTGGTTCTT GCCTGTTTCT CTTGAGGCTG CCTTGGCATT CACCCACGCT 001360 001361 CTTGGTTGTT ATTTTTTACT CTCTGCCCCT GTGAAAATAC ACCTGCTCTC GTGGCTTCAC TGGCCACTTT CTCAATCCTG 001440 001441 GCTGTCTTCT TTATGTTCTT GTTCCCTGTA TCCTATGGGT CTGTTTCTTT CTGACTACTC ACCATGAGGG CAAGAGATTC 001520 001521 CAAATATCTA CAAAATTCCT CACATTCCTG AAGAAACCCT CCCAGTCTTT CCCTAGTGTC CTGTCTCTGA GGATACCACC 001600 001601 TTGCTTGGTG AGAACTTTCA TAGATCTAGC CTCTTCATTT ACCAACTCCT ACCAAGCCAC TTTTCTTGTG AAATGTCCCA 001680 001681 TATGCACATT TTGTGCATTC AATAAATAGC TTTTGAGTTA GGCCAGGCAC TGTATTGGAC ATGGATTAAA CATAAAATAA 001760 001761 AGAAAGCAGA TCTCGGCCAG ACACAATGGC ACATGCCTGT AATCCTAGCA G |
Predicted Small Protein
Name | NONHSAT077535_smProtein_689:883 |
Length | 65 |
Molecular weight | 7410.4443 |
Aromaticity | 0.203125 |
Instability index | 62.11875 |
Isoelectric point | 4.74908447266 |
Runs | 12 |
Runs residual | 0.03890625 |
Runs probability | 0.0445592651476 |
Amino acid sequence | MVCFSFCFCSEMEYCSVAQAGVQWYDLGSPQPPPPRFQQFSCLSLPSSWDYRHVPPCLAN FLYF |
Secondary structure | LEEEEEEELLLLEEEHHHHLLEEEEELLLLLLLLLLLLEEEELLLLLLLLLLLLLLHHHL LLLL |
PRMN | - |
PiMo | - |