NONHSAT075626
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT075626 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
906 nt |
Genomic location |
chr2+:176973605..176983971 |
Exon number |
3 |
Exons |
176973605..176974086,176976111..176976244,176983682..176983971 |
Genome context |
|
Sequence |
000001 CTCTCACCCC CTGGTCTCTT TGCCTTGCAG TTGCCCCCCA GCGGTCCCGG AAAAAGCGCT GTCCCTATAC CAAGTACCAG 000080
000081 ATCCGCGAAC TGGAACGCGA GTTTTTCTTT AACGTGTACA TAAACAAAGA GAAAAGACTT CAACTCTCTC GGATGCTCAA 000160 000161 CCTCACTGAC CGGCAAGTCA AAATCTGGTT CCAGAATCGC AGGATGAAAG AAAAGAAACT GAACAGAGAC CGTCTGCAGT 000240 000241 ATTTCACTGG AAACCCCTTA TTTTGAGAGC TCCAGGAAGC GCCCTCACCC CAGCCCCACT CACCCACCCT CCTTCCCACC 000320 000321 AGCCTGCTCT CCGCAGGCCC ACTGTCCTTG GGTTTAATGA CGTCTCTTCT CTGTGGAACT TCACGATTCC TTCCCACGGT 000400 000401 CAACTCGGGA CCTCCCAGCG ACCACTGCAG CCTGCGGACG AGGCCGGGAC TTGGCCGAGC GGATCCTAAT AAGGGGAAAA 000480 000481 TGGGGCCTGG AGATCCACAC GAGGGCGCGC TCACGTTCCA GAAGCCGCGT TTGACCAAGA GGCCGCGGTA CCTTGTCTGT 000560 000561 CCAACACTGG ATTCTAATAG GCGACCTCAA CCCCTTAGAA ACAGGCGGCA GCTAAGAGGA AATCAAGTCT GATACACCAA 000640 000641 CCAGCAATTG GCTCACTGCA AAGAGTGGCA GAAAGAAGAG GTGCCCTTAC ACTAAGCACC AAACGCTGGA ATTAGAAAAA 000720 000721 GAGTTCTTGT TCAATATGTA CCTCACCCGC GAGCGCCGCC TAGAGATCAG TAAGAGCGTT AACCTCACCG ACAGGCAGGT 000800 000801 CAAGATTTGG TTTCAAAACC GCCGAATGAA ACTCAAGAAG ATGAGCCGAG AGAACCGGAT CCGAGAACTG ACCGCCAACC 000880 000881 TCACGTTTTC TTAggtctga ggccgg |
Predicted Small Protein
Name | NONHSAT075626_smProtein_356:631 |
Length | 92 |
Molecular weight | 10130.5497 |
Aromaticity | 0.032967032967 |
Instability index | 54.8868131868 |
Isoelectric point | 11.5067749023 |
Runs | 9 |
Runs residual | 0.0345695970696 |
Runs probability | 0.0471549981354 |
Amino acid sequence | MTSLLCGTSRFLPTVNSGPPSDHCSLRTRPGLGRADPNKGKMGPGDPHEGALTFQKPRLT KRPRYLVCPTLDSNRRPQPLRNRRQLRGNQV |
Secondary structure | LLEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEELLLLL LLLLEEEELLLLLLLLLLLLHHHHHHLLLLL |
PRMN | - |
PiMo | - |