NONHSAT075570
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT075570 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
overlapping(AS) |
Length |
2446 nt |
Genomic location |
chr2+:175411869..175639555 |
Exon number |
4 |
Exons |
175411869..175411976,175412097..175412205,175594449..175594552,175637477..175639555 |
Genome context |
|
Sequence |
000001 AGGGGCAGAG TTTTGAGGCA GAGCTGATCA AGGGAACCTC AACAAACAAC CCCAGCCATG GAGGCGGCGG TGTCTTTGAA 000080
000081 GACCCCATGA GAGCATCAAA CAAGGGAGAG AGCCTGGAAC AAATCATCGT AGTAAAATGG CGGCAGAGAG CTAGTAATGT 000160 000161 GTCTGGAATT GGTGGGTTCT TGGTCGCACT GACTTAAGAA TGAAGCCGCG GACCCTCACG GTGGTGTCTT TGGTGGCTGT 000240 000241 TCACCCTTCC ACAGTAAACG TGCTTGGGAA GCAACTTTGC CAAAAGCCTT CGGACAGTCC AGCGTCAACA CCGCAAGCCA 000320 000321 AGTGGAGGAG AAAAATCTGC GCCTCTTTCT CTCAAGGGAT ACTTTGTCTC TGGGGTACTT TCTGACCCAG TGGACCCCTG 000400 000401 GCAGAAGTAA GCGTGGACTG TGGCTACAGG ACCACGCAGA GTCAACACGA ACCGAAGCCA GGCCTTGGCC ACGGCAGCTC 000480 000481 TGGGGTCCAA CCACTTGATC AATGCAGGAA ATGCTTTGAT GGCAGAATTC TTCCATGGCC AGCTTCTCAT ATTCTCTGGG 000560 000561 ACAGACACAA ACCAAGAAAA ATGAGTGTGG CGCAGAATCT GATGTGTCCT TCCTTACCCC GTGCTGGTAG CAAAAAGTAT 000640 000641 GTCTTGAACT TTTCTTTGTT ACACACAGTC TGGGTAATAA CAGACTGAAG GAAAACTAAA GAAGCTTGGG AGGCTAAGTT 000720 000721 CAATGACAAA TGAAGAACTA AGGCAGAGAA AAAAGAGAAT TGAGAAAGTG TCTGGGTGTC TGGAGAGGTT GGGGGAATAG 000800 000801 AGAGGGAGGA GATATAATTG GCCAGATAAC TTGAGAGTGG GAGAGGAGTG CAAACATTAT TTTTGAGGCG CTTTGTTGGA 000880 000881 TATTTAAAAT GCACTCCTAC CTTTGGCATT TTCTCAAAAG GCAAGAAAGA TTTGTTTTCA ATTCTATTTT TCTGCTGGAC 000960 000961 TGAACCAGTG CCAAGACTGG ACCATGTAGG ATCCTGGGTT TATTTCAGTT ACATAAGCAA ACGTTGCTGT GATTTGGAAT 001040 001041 AGTCAAAGTC ATGAATGTTT CTCAACTTCC ATTTTGTCAG CTGCTTGAGT TTCTATTCTG AGAGGTGCTA ACTGTGAACA 001120 001121 TTGTTATTCA CTTGTGTTCC CTAAATCACT TTTAATTAGT TTTAATTTGA ACCAAGAATG TTCTACTGTT GAAACTATGT 001200 001201 CAAGAATGAT CAAAAATGAA ATTAATAAAG AATTCGCGTC AAAAAAATTT GCACTAATAT TACAGTATTT TATAATGTCT 001280 001281 ATCTCAGCAG AGTCACAGAT AATTTAGAAT TTTTAATTTT GTTTTTAAGT GATTTTCCTC AAAGCTATAA TAGCCTTGGT 001360 001361 AAAGAGTTTA GTTAAACATT ATTTTTCACC TCTCACGCAT TTTGTGTAAT GAAATTTTTC TATCATCTTC CAGTGGAATT 001440 001441 AATTGCATTG GTGCAAAAAA TGCAATCAAA TCGATGACTG AATTTAGCCT TTGAAACCTC ACGTCTAGCT GGGATAGTTA 001520 001521 CTATATTCAT TACATACTGA AAAATGATAA GCAGTAAGCT TTTCTGCTAA AAAACTGCCA AAGATAAGTT TTTCAAGGCT 001600 001601 CTCAAAATAT CCTAAAGCTG ACAATACAAG AAATGTTAAA ATATTGTTGG AATTTTTAAC GGAATCTTCC TTCTCTTCTT 001680 001681 TTCCTGTTTA AGACAATAGT AGTTAGTTGT CCACTAATCG TTAATACACG ATTTTCTAAC AAAGACTTGC ATATCCTTTT 001760 001761 GGCTAAAAAG TGGCCAAATA TCAGAGAGCT AGAAGTTTGG GAGACAGCCT TTAGTCTTTT CCAAAGCATG TAAGCCCTTT 001840 001841 TGAATCATTT TGGGTAAATG GCGAAGATTA AACAGAATTC ATAAAGGGTT TCTGATACAT AAGTGGAATG TGCCTGTGAG 001920 001921 GACACTACAC ATGACAATAA TCTAAGCATG CTCTCTTTTA GTCCCAAAAC GTGTAGAGTA ATGTCACATG AAATTTACAG 002000 002001 GAGGCCATTG ACTTGGACTG AGCTCCTGCA CCAGGCCTAA CAGACCAAAC CAAAATGGAG TCACTCATGC TGAAGTTCAC 002080 002081 ACCACCAAGC CAAAACTGAG TTGTTTATCC GATCTTCCAA GAAATCAAGA AAGACAGGGA GATAACAGCC CAATCCCCAA 002160 002161 ACAGGCCAGT TTTTGCTGGC ATGATAGGAA GGCCCCTCTG CTTCAAACTT TCCAAAGAAA GTAACTTGGA AACAACCAAT 002240 002241 CTGCTTTTTG TTCTCCGTTT CTGCTTTCCT CAACCATTTT CTGACCATAA AACCAACATC CTTTGCTCGG CTCATGGGAA 002320 002321 CATTCATTCT ATTTTGTAGA ATGAGGTGTT GCCCGATATT CTAGATTTGC AAATAAAAGC CAATTAAGAT CTTTAAATTA 002400 002401 AAAAAAAAAA AAAAAAAAAA AAAAAAAAAC AAAAAAAAAA AAAAAA |
Predicted Small Protein
Name | NONHSAT075570_smProtein_2180:2338 |
Length | 53 |
Molecular weight | 5932.9167 |
Aromaticity | 0.0961538461538 |
Instability index | 51.4057692308 |
Isoelectric point | 8.63507080078 |
Runs | 9 |
Runs residual | 0.0227075184702 |
Runs probability | 0.048882215549 |
Amino acid sequence | MIGRPLCFKLSKESNLETTNLLFVLRFCFPQPFSDHKTNILCSAHGNIHSIL |
Secondary structure | LLLLLLEEELLLLLLHHHHHHHHHHHHHLLLLLLLLLLLEEELLLLLHHHHL |
PRMN | - |
PiMo | - |