NONHSAT075199
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT075199 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
756 nt |
Genomic location |
chr2-:163050069..163055352 |
Exon number |
3 |
Exons |
163050069..163050690,163051211..163051258,163055267..163055352 |
Genome context |
|
Sequence |
000001 TACTTGCCAT CTAAGGAAAG AAAGGTGCCA ATATTACACA GCAAGTTTCA GCGACTACGC CAAGTACTAT GCACTTGTCT 000080
000081 GCTACGGCCC AGGCATCCCC ATTTCCACCC TTCATGATGG ACGCACTGAT CAAGctacat cacattgttg ccacgtatga 000160 000161 acgccctgaa atttggaggc tctttccatt ttcaactgct atcaagacag tcctcctcta tcctgtattt gtgatattgg 000240 000241 ttCAAAATAG TTCACATCTC AAAGACGACC AGTTTTGCTC GCAGCAGAGT TGTCCAAGTA TCTAATTGCT CTGATACTCT 000320 000321 TCCTGCTGGC TCTCCATTAT CTTTTGATTT ACTATTAAAC AACATTATAG GGTTGGAGTT GTTGGAGGCC AGGGACAATG 000400 000401 AGGCAGATGC CACTTTCTTC AGCACTCATG CCTGCGATTG TCCCTGGACA GCTTTGGTGA CAAGTCAGGA GACTGCCTTG 000480 000481 GGATTACTTT GGCTGTCAGC TCAATGGCTC AAGTGTAGGT GAAAATAACA AGAAAAAAAA ACAAAAACAG AATCAATTTG 000560 000561 GGAACTCTGG ACAGGACAGG CATTGTGATA ATGGGACTGT GAATTTAGTT TCATTTTAAG GTTTTTTTTG AAACCTTGTG 000640 000641 TCTAATAAGG AAATACTTTT AAGAATAACA GATTATATTT CTTAATTTGA CCATCTCAGT CAGTGAGATT GATTTCAAGT 000720 000721 CGACAAGGTT TTGTTTTAAT AGAAATCACT ATTAGC |
Predicted Small Protein
Name | NONHSAT075199_smProtein_68:304 |
Length | 79 |
Molecular weight | 8904.3417 |
Aromaticity | 0.115384615385 |
Instability index | 71.3987179487 |
Isoelectric point | 6.88604736328 |
Runs | 16 |
Runs residual | 0.0714509068168 |
Runs probability | 0.0542748630984 |
Amino acid sequence | MHLSATAQASPFPPFMMDALIKLHHIVATYERPEIWRLFPFSTAIKTVLLYPVFVILVQN SSHLKDDQFCSQQSCPSI |
Secondary structure | LLLEEELLLLLLLHHHHHHHHHHHLEEEELLLLHHHHHLLLLHHHEEEEELLLEEEEEEL LLLLLLLLEELLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLL LLLLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToo oooooooooooooooooo |