NONHSAT073812
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT073812 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1398 nt |
Genomic location |
chr2-:114356613..114358838 |
Exon number |
4 |
Exons |
114356613..114357773,114357939..114358040,114358319..114358403,114358789..114358838 |
Genome context |
|
Sequence |
000001 ATTGGAGGAA AGATGAGTGA GAGCATCAAC TTCTCTGACA ACCTAGGCCA GTGTGTGGTG ATGCCAGGCA TGCCCTTCCC 000080
000081 TAGCATCAGG TCTCCAGAGC TGCAGAAGAC GACGGCCGAC TTGGATCACA CTCTTCTCAG AGCCCAGGCC AGGGGCCCCC 000160 000161 AAGAAAGGCT CTGGTGGAGA ACCTCTGCAT GAAGGCTGTC AACCAGTCCA TAGGCAAGCC TGGCTGCCTC CAGCTGGGGA 000240 000241 TTCTGCCAGC ATAGTGCTCC TGGACCAGTG ATACACCCGG CACCCTGTCC TGGACAAGCT GTTGGCCTGG ATCTGAGCCC 000320 000321 TCGTGGAGGT CAAAGCCACC TTTGGTTCTG CCATTGCTGC TGTGTGGAAG TTCACTCCTG CCTTTTCCTT TCCCTAGAGC 000400 000401 CTCCACCACC CCGAGATCAC ATTTCTCACT GCCTTTTGTC TGCCCAGTTT CACTAGAAGT AGGCCTCATC CTGACAGGCA 000480 000481 GCTGCACCAC TGCCTGGCGC TGTGCCCTTC CTTTGCTCTG CCCGCTGGAG ACGGTGTTTG TCATGGGCCT GGTCTGCAGG 000560 000561 GATCCTGCTA CAAAGGTGAA ACCCAGGAGA GTGTGGAGTC CAGAGTGTTG CCAGGACCCA GGCACAGGCA TTAGTGCCCG 000640 000641 TTGGAGAAAA CGGGAATCCC AAAGAAATGG TGGGTCCTGG CCATCCGTGA GATCTTCCCA GGGCAGCTCC CCTCTGTGGA 000720 000721 ACCCAATCTG TCTTCCATCC TGTGTGGCCG AGGGCCAGGC TTCTCACTAG GCCTCTGCAG GAGGCTGCCA TTTGTCCTGC 000800 000801 CCACCTTCTT AGAAGCGAGA CGGAGCAGAC CCATCTGCTA CTGCCCTTTC TATAATAACT AAAGTTAGCT GCCCTGGACT 000880 000881 ATTCACCCCC TAGTCTCAAT TTAAAAAGAT CCCCATGGCC ACAGGGCCCC TGCCTGGGGG CTTGTCACCT CCCCCACCTT 000960 000961 CTTCCTGAGT CACTCCTGCA GCCTTGCTCC CTAACCTGCC CCACAGCCTT GCCTGGATGT CTATCTCCCT GGCTTGGTGC 001040 001041 CAGTTCCTCC AAGTCGATGG CACCTCCCTC CCTCTCAACC ACTTGAGCAA ACTCCAAGAC ATCTTCTACC CCAACACCAG 001120 001121 CAATTGTGCC AAGGGCCATT AGGCTCTCAG CATGACTATT TTTAGAGACC CCGTGTCTGT CACTGAAACC TTTTTTGTGG 001200 001201 GAGACTATTC CTCCCATCTG CAACAGCTGC CCCTGCTAAC TGCCCTTCTC TCCTCCCTCT CATCCCAGAG AAACAGGTCA 001280 001281 GCTGGGAGCT TCTGCCCCCA CTGCCTAGGG ACCAACAGGG GCAGGAGGCA GTCACTGACC CCGAGACGTT TGCATCCTGC 001360 001361 ACAGCTAGAG GTCCTTTATT AAAAGCACAC TGTTGGTT |
Predicted Small Protein
Name | NONHSAT073812_smProtein_1151:1381 |
Length | 77 |
Molecular weight | 8560.6803 |
Aromaticity | 0.0789473684211 |
Instability index | 66.2565789474 |
Isoelectric point | 10.0609741211 |
Runs | 9 |
Runs residual | 0.0229885057471 |
Runs probability | 0.034838760329 |
Amino acid sequence | MTIFRDPVSVTETFFVGDYSSHLQQLPLLTALLSSLSSQRNRSAGSFCPHCLGTNRGRRQ SLTPRRLHPAQLEVLY |
Secondary structure | LEEEELLLEEEEEEEEELLLHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLEEEEEL |
PRMN | - |
PiMo | - |