NONHSAT072807

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Basic Information

Transcript ID

NONHSAT072807

Source

NONCODE4.0

Same with

,

Classification

intronic(S),antisense

Length

2299 nt

Genomic location

chr2-:101635004..101637620

Exon number

2

Exons

101635004..101636237,101636556..101637620

Genome context

Sequence
000001 TAATAGAGAT GAATCAGAAA TCCCAGAGGG CTCTGTCCCC CCAGTGCTGT GGTTGTGGTT CTGGTGTTGG ATGGTGCCTG 000080
000081 GGGAGGCTGG TAGGCACTGA GGGGGCTTCT AGAGCCATGA TATCCTGGTG GCTTTTACAA CTATTAGTGC ACTTACACAT 000160
000161 TCTCCTTTAT CCACTGGGCA TATGTCCCAA GAACCCCCCC AACTCCCCGT GGATGCCTGA AACTGTGGAT AGTACCAAAC 000240
000241 CCTATATACA CTCGATTTTT TCAATCTGAT CACCAAGATG GCTAATGAGG GACTAACAGG CAGGTAGTGT AGACCTTGTG 000320
000321 CAGATACTGG ACAAAGGGAG GATTCACGTC TGGCCTGGGA TGGAGTGGAA CAGTGCAAGA TTTCAAAATA TTACTCAGAG 000400
000401 CAGCATGCAG TTTAACACTT CGGATGAGGG GGACTACTGT ACAAACATTG AAGATGCACC TGGACATTAC TTGTGGGCTT 000480
000481 TCTGGGTCTA CCTCCCAGAT GCAGCCATTG CTGAACTGGC ATCTTATACC TTAGGCACGC TCTCCCCAGT GAGCATTCTG 000560
000561 TGCTGGCCAC GCAGTCCCTC CTTGACCTTC TCATTGACAA TATGCACTAT TGTGACTTGA GTGCAAATTG TTTATTATTT 000640
000641 ATTTATTTTT GGTTTCCCTT TCTCTGTCAA CTGATCATAA ATGCAAATTG TTTAGCATCA CTGAAGTTTT CTGCCCTTTA 000720
000721 TGCCAATATA AATTGAGTTT TAATTTATCC TTATTTTTCA CAAATGTTTT TCTATTAACA TAGAAGGCAT GCATAATTGT 000800
000801 TTATCTTCAT CATATCATCA TCATCATCAT CATCTTTCCA TAGTTGTCAT TATCTATATC TGGCATTCTT AAATAGAACA 000880
000881 TGATTGTTTT TATTTTACTC TATTATTTTA TCTTGGTTTT AAAACAAACA TTATTTTGGA ATAATTTTAG ATTTATAGAA 000960
000961 AAGTTGCATA GATTAGTACA GATGGAATTT CACCATGGTA TATTTTTAAA TTTATAATTG GCTTTTGAAT TATCATCTAA 001040
001041 GATTGATTTT TGATTCTTCA TCTAACTTTC TAATGAATTA CTACTTGTTT CCAAATAAGT TTATTTCTAA AAGACATTTT 001120
001121 AATTACATTG ATTTATTAGA AGCATTTGTA GTCCTTCATG GTTTCAGAAA ATCAATTGTT CAGACCTTTT TGAACATATC 001200
001201 TGATTGTGAT ATTCATACTG TGTAACTCTG AATTTAAATC AAGTTCAGTG GAAATTAAGA TATGATGTAT TATTTTTTAG 001280
001281 TGTATGTTTC GTATCTGAAT TTTTGACGCA GTTTAAAAAG CCTTAAGAAA ACGACAAAAA AGCTAGAGTG CAGACAACCT 001360
001361 AAAATCTCTA TTTTAAAACA TCATTTTCCT GAGGCCATGC AGACTCATAT CTAAGTTTTT TTCATTTAAA TAGACTTAAT 001440
001441 TCTAACAAAT ACTTACTTTC ATAATGAAAA ACTTTTTAAA GGTGGGACAG ACATACTAGT TACGAAATGA AAGTTTTCAA 001520
001521 TCACAGATCA GGAAGTATAA TGAGATTACA TCAAATGTGA ATTTGTGTGC CTAAAGAATT CTCTTCACTT AAGTCTTATT 001600
001601 ACTTGCCTGT CGAAGAGGCA AGGGCAGAAG ACATCAGTAC CTTGTTGAAA CCCCGGCCGT GTAGAACAGG CCTGGCCCTC 001680
001681 TGCCAGGGTA ATATGGGAGA CAGACGTCCT CGGTGAGCTT GGTTGTAAAG GCATCTGCTG CAGCTCAGGA AGCAATGAAG 001760
001761 AGCCGAGACC CAAGGCCTCA TCCACTTCCA GGAGGGCTCC CTTTATGGGC TCTTGGCGAC TGTAACACTG TTTAGCACAG 001840
001841 AAACTAGCAC AGAAATATTA CAGATGATTT GGTACCATGT CAGGTAACAC ACAGACGAAG AGCATTCCAG AAGATTAGGA 001920
001921 CATCAACAGT TTTTACTGCA GATTGATAAA CCTACGGATA TTGGCCATTT TGCTTAGTTA ATTATACTAA TTGGACTTTC 002000
002001 AGAGGAGAAC TTCCTGGGAG AACTTTATTT TCCTTGGAAA GAAACATAAC AAACTGCTGA GAAAGTTATA TTGAAAATGG 002080
002081 ACACACACAA ATGAGACAAT TTGGAGGTTT TTCTGTAAGT TTGTATACTG AGCAAACCTA TGAGGACCCC TCACATCATG 002160
002161 AGTTCCTTCT GCGAACTCTG AGATTCAGGG AATATGCTAT TTTATTCACA GATAGGCTCT CTGAAATGTT TGCCTGCCAG 002240
002241 CCTGAATCCA CATTAAAGGA TGTCCTTAAA ATGTTGATTA ATAAAATTGA AGCTGCTCC
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Predicted Small Protein

Name NONHSAT072807_smProtein_359:619
Length 87
Molecular weight 9659.7606
Aromaticity 0.139534883721
Instability index 65.9662790698
Isoelectric point 4.06903076172
Runs 17
Runs residual 0.0580527594585
Runs probability 0.0574571110903
Amino acid sequence MEWNSARFQNITQSSMQFNTSDEGDYCTNIEDAPGHYLWAFWVYLPDAAIAELASYTLGT
LSPVSILCWPRSPSLTFSLTICTIVT
Secondary structure LLLLLHHHHHHLHHHLEELLLLLLLEEELLLLLLLLEEEEEEEELHHHHHHHHHHHHLLL
LLLEEEEEELLLLLLLEEEEEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLL
LLHHHHHHHHHHHHHHHHHHHHHHHL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToo
ooTTTTTTTTTTTTTTTTTTTTTTTi