NONHSAT071697

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT071697

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

4010 nt

Genomic location

chr2-:74644846..74648855

Exon number

1

Exons

74644846..74648855

Genome context

Sequence
000001 GCCCTTGGGC GGGGTGAGCG GCCGGAACGT GCCGCGGGCG GCGCGGTTGC CGGGGCAACT GTGGGCGGGG CGAGCGACCC 000080
000081 CGAGCCCGTG GTTGCCCAGG CGACTGTTAG GTGGCTTACG CGGCCCGGAT GCAGCAGAAA CACCAGCGTT GCTGCGACCG 000160
000161 CGTTGGCGAT GGCGCACGAA GGCTCGGTGA GCTTCAGTTC AGCTGGGGAT GCGCCAGAGC CAGGGTCGGC CGTTAAGGTC 000240
000241 GGTGTCGGGA ACAGTGGGCT GGCTCTGGGC CGCCCAGTGC CCCTACTTGC TCCCGCCCAC CGCGCGGGAG TTTAGATGAC 000320
000321 CAAGGAAGCC ACGTCGGTAC TCGGGCAGAA AACCTACACC TGCACGGTGC CCACTCAAAC GCTTTGTTAC ACTCAAGCCA 000400
000401 TGAGGGAAAG GGTCAGTGGG TGGTGTAGAG CCCGAGAACA GGAAGTGGAT TTTGAAACAG CTAATGAATG TAGTAAGTCT 000480
000481 CTTACATGGT GGTGCGTATT TAAATGGATG AGCATTTAGA GAGGGAAGAT AACAGAAAAA ATCTATTTCG AGAATTTCAA 000560
000561 GAGGAAGAAA TATATTAAAT AATTCAGAGA CTGCACTTGA AAGTCAAATT GTTTAAGAGC CAATCAATTT TAAAATAAAG 000640
000641 AAAACGGggc cggtctcaat ggctcatgcc tgtaatccca gcactttgag aggctgaggc gggaggattg cctgagctca 000720
000721 ggagttcaag accagccagg ccaacatggc gagaccccgt ctcgactaaa atacaaaaaa ttagctggat gtggtggcgc 000800
000801 ggtgcctgta atcccagcta ctcgggaggc agaggcagga gaattgcttg aactcgggag gcggaggttg cagtgagccg 000880
000881 agatcgcgcc actgcgctct agcctgggtg acagagagag actgtctcaa aaaaaaaaaa aaaaaaaaaa aaaaaaGAAG 000960
000961 AAGAAGAAAG AAAACGGATT TGAAGAGCCT TTGTGCAAAA ATATCTCTGT CCCTTCTGGT CACCATCACG GGTGTCAGAT 001040
001041 GCGAGGCTGG GAGGGGAGGT CTAAGGAAAC AACTCTCTTT ACTCAGTCCA GTCAGCCCTG CTCTAGTCAA GCTTGGCCTG 001120
001121 GGCTATGGGC CACTCCTGGT GCTTGCTACA GGGCTGTTCT CACTGGTGGA TAGGGTTAAT GAGACTTCAG GGATTTTGAG 001200
001201 TTCTGCAAGA CTTAGGAAAC AGCAGATTTG GGGGGATAAT GAATTTTAGG AAACAGATAT GAGACAAGGT TTTAGCGGGG 001280
001281 CAATAGGCAA AGGTTTGGGA AGATCACATT TGGAAGTACA TTTTGGAAGG AACCAGGTTC AGGGAGACTG TTGTGGGGAA 001360
001361 TTGAGGGAGC TCCCAAGAGA TTGTTTGTAA ACTTTTTATG TCTCTAAAGT GAGTTTTGGG GACTAGTCTT Tttttttttt 001440
001441 taagtgatta caaaaggaaa caaactcatt gtagagaact tacaaaatag aaaagagcat aggaaggaaa cgtatcctct 001520
001521 gttatcattt tgaagttttc cttttgttga acacatagtg gtttacatat atgagatcat aattgatgtg taagtttgta 001600
001601 tcctgcttct ttcaattaac gttacatcat aaacatttgc tttatgccat tgcaaattct ttctaaagat tacctttaat 001680
001681 ggctgggttg gtggctcatg cctgcaaggt gggcagatca cttgaggcca gttcaagacc agtctggcca acatggcgaa 001760
001761 accccatctc tactaaaaat agaaaaaaaa ttagccaggc ctggtggcag gcgcctgtaa tcccagctac tccggaggct 001840
001841 gaggcaggag aattgcttga acctgggagg cagaggttgc agtgagccga gatcttgcca ctgcactcca gcctgggtga 001920
001921 cagagcgaga ttccgtctca aaaacaaaaa caaacaaaca aaaaaagatt acctttaatc attgcataat atttcagtat 002000
002001 atatagcatg tcaattattt attctctttt taaagacatg ttttcaatat tctgctatta taaaaatacc gcagagaatt 002080
002081 tgttggagaa tatattttta tcttcatttc agaaaatgcc ttttggttgt atttatagaa ctgaaattgc agggttgagg 002160
002161 aagtgaaaac attttttaat gtcttcatgc atactgTTGC AGCATGGTAT CACACTAAAC CTTTGCCAAT GCTGAGTATT 002240
002241 CTTGTTTTTA AAATAATTCC AATTTGATGA ACTAGAAATC AGAATGTCAA TACtatattt attagtcatc tacagtccct 002320
002321 ctcttgtgaa atgtcatgtc ctttgcttat ctttgggatc ttaaatggtt tttcttctta tAGTTTAAAT TTTTATTgca 002400
002401 atatagccca agctggactt gaactcctgg gctcaagcaa tccccctgcc tcagcctccc gagcagctgg tactgtgggt 002480
002481 gtgcgccact gtgcctggcC ATTTTTCTTC TTCTATtttt tattttatta gttttttttt tcttttttga gacagagtct 002560
002561 cgctctgtca cccaggctgg agttcagtag catgatctca gctcactgca aactctgcct cccgggttca agtgattctc 002640
002641 gtgcctcagc ctccctagta gctggaatta caggcgccca ccaccatgcc tggctaattt ttgtattatt agtagagacg 002720
002721 gggtttcacc atgttggcta ggctggtctc gaactcctga cctcaaatga tccacccacc tcggcctccc aaagtgctgg 002800
002801 gattacaggc gtgagccact gcgcccggcc ATTTTTTTTT TTATATGAGC TTTTAATTTA CTCGGGGATA TTTATCTTTT 002880
002881 TTCATATTTG TTGCAAATGT CTTTGAGAgg ctctggagtc agacagactt gcatgtgaat gcattctgac ttcactacat 002960
002961 cctacttgta tgatactggg taaattacCA TAAAATGGAG ATAAGAATAG TTGGTTAAAA AAAAAAAATG TAGAGAACTT 003040
003041 TTTAAGCTCC CCTGAGCCGG GGCTGTGCTC TTCTAAGTGG GACTCCGAGC CTGGGCTATT TCTGGCGCTG GCGCGGCTCC 003120
003121 AGGAAGGCAT CCGCATTTGC GACCAGGGGC GGCTGCGGTG GAGACTGGCC TGTCCTCAGC GCCCAGCACC GCTGCTCCCG 003200
003201 GCAAACCGGA GCATGCACCG CAGGCCAGCG GCCGAGTTCG CCCATCCCAG CCATCACTTT TCCAACTAGT CCTTAGAGAA 003280
003281 GGGAAGATGA GCGAGTCGAG CTCGAAGTCC AGCCAGCCCT TGGCCTCCAA GCAGAAAAAG GACGGCACTG AGAAGCGGGG 003360
003361 CCGTGGCAGG CCGCGCAAGC AGCCTCCGGT GAGTCCCAGG ACAGCGCTGG TAGGGAGTCA GAAGGAGCTC AGCGAAGTGC 003440
003441 CAACACCTAA GAGACCTCGG GGCCGACCAA AGGGAAGCAA AAACAAGGGT GCTGCCAAGA CCGGGAAAAC CACCACAACT 003520
003521 CTGGGAAGGA AACCAAGGGG AAGACCCAAA AAACTGGAGA AGGAGGAAGA GAAGGGCATC TCGCAGGAGT CCTCACTGGA 003600
003601 GGAGCAGCTT CCTTCTGGGA CTGGACAGCT TTGATCTGCT CCCAACcccc cacctcccac cccccacccc ttccctacac 003680
003681 ccaccatcac caccgcctcc agccaccacc ctcatcttcc acctgcacct tcaccaccac ACTACACAAC ACACCAGCCG 003760
003761 CTGCAGGTCC CTATGGGCTG AGTGGAGAGG ACTTTTCCCC TGGCCTCTTC CCATCCCTAC CCCCTCCTCC CCCCGTCCAC 003840
003841 CCACTCATAC ACATGTGCCC TCCTGGACAA GGCTAATGTC CTGCTTAGCC GCACCCTGCA CCTGCTGCGT CCCTGATCCC 003920
003921 TTGGTGGTGA CATTGCTCTC TGGGCTTTTG GTTTGGGAGC CACTTCTCTG CTCCTCCACT GTTGCCTCTG GCTTCCCATA 004000
004001 GAGGGGCCTG
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Predicted Small Protein

Name NONHSAT071697_smProtein_2330:2530
Length 67
Molecular weight 7254.303
Aromaticity 0.212121212121
Instability index 60.3353030303
Isoelectric point 7.73089599609
Runs 9
Runs residual 0.0142442387951
Runs probability 0.0655851930361
Amino acid sequence MSCPLLIFGILNGFSSYSLNFYCNIAQAGLELLGSSNPPASASRAAGTVGVRHCAWPFFF
FYFLFY
Secondary structure LLLLHHHHHHHLLLLLLLHHHHHHHHHHHHHHHLLLLLLHHHHHHLLLLLLLLLLLLLLE
EEEEEL
PRMN LLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHH
HHHHHH
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