NONHSAT071569
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT071569 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2035 nt |
Genomic location |
chr2+:71916293..71918581 |
Exon number |
2 |
Exons |
71916293..71918067,71918322..71918581 |
Genome context |
|
Sequence |
000001 TCTCAGGCTG CTGTGCGGCT GGTTGCAGAG GGCCATTCTA GAAGAGTGGT TCGCTAATCC AGGAGCCAAA TGGGAAAGGT 000080
000081 CTGAAAGGCA GGGCTCAGGG TGATTCATCC ATTCATCCAT CCATTCATTC GCGCATTAAA GAAATATATA TATCATATAT 000160 000161 GCATTGGGGG GGCTATCTGT GTACCAGGCA GGGTGGTAGG CTCTAGAGAT ACAATCTTGA GTAAGATAAA CATGGTTCCC 000240 000241 ACCCTCCTAG AGCTCACAGT TGAGTAGAAG AGGCAGATAA GTAGATGGGC AATTACAATA CACTGGTGGA TGATGAGCAG 000320 000321 GAGCTGTGGA GTCAAGAGCA GGGATGGAAA AGACAATAGA GGGAGCAGTA GTTCAAAACC AGAAGCTGGT TCAAAGATCT 000400 000401 CTAGGAGTTG CTACATGGGC ATGGGGCCAT GGTTTCCAGC CAGGGGCACT TTTGTCCTCC AGGGCACGTT TGGCAATGTC 000480 000481 TGGAGATATT TTTGACTTCA CAACTAGTGG GGGCAGGGGG TGGTGGTTAT GAGAGGGACT GAGGCACCGT TAGAAAGGTT 000560 000561 TTCTCCCCAG TAAAAAGGGG CACAAAAGGA GACACATCCT CATCTTCTGC CTCTTAATAT TATGGAACAA TGTAATGACT 000640 000641 GGGGCTGTGG CTGCCATCTT GTGATCCTGA GGCGATCAGC CTGAGGAAGA AAGCCAGCAC ACAGAGGACG GCAGAGGAAG 000720 000721 TGGGGAGGAC CTGGTTCTTG GTGAAGCTAT TGAGGAAGAA CCAACCCTGA AGTCACCCTA CCACCAGAGG AGACAGCTTG 000800 000801 TGACTCAGGG CCATACATTC CTTGTAGCGT AAGCCATCTT TGGTTGGGTC CTGTGTTACC CACAGCTCCA AGCCTCCTTG 000880 000881 CCGGCGAATT TCATTCTGCT CCTCTGAAAC CGGTTTTCAC TGCCATCTGC AATAACCACG GCTGCCGTGC ACAGGCACCA 000960 000961 CATCTAAGAC ATCATACGTT TATTATTTAT TATAGCAATT TTCCCACAGA TGGCAGTAAA GTGTTTTGTT CTAATAAAAT 001040 001041 CAGTGTGTTA CAGTAGTTTT CTGATAGAAG TAAATTACCT TGAGGAAGGG GCACCTTTTT CTAATTCACA CAAGGGCACA 001120 001121 ATCTAGCCTT GGTGGTTAAA TCTGTGGGCG CTCACCCTTC ACGACTCAGC TGTGGCTGAC AGCACGGACG TTCTCTGCTT 001200 001201 CTTGATCAAC CTTCTGTCTG TACCCAGCTT CTGTGATACC ACAGTCGCCT GGTGGTCCTC CTCTCCCTGT GGCTTGGCGT 001280 001281 CCCTCTCTGT TCGTCTGTGA TGTTCCCCAG GTCTCTTTCC CTGGCGCTGT TCTCGTATTG TATGGCTCCT AGGCACCCTC 001360 001361 ACCTGCCCCA CTTTCTCTGC CTTCTACAGG TGAATGAACC CGGAATCCCT CACTGTAGCC CAGTTTCTCC CCTCCGCTGC 001440 001441 AGGCGCCTTA GTGTACTGCT TACGCACTGG CACTATGAAC TCAAACCCTC CCCCTCAAAG TCTCCATCCT CCACCCCATT 001520 001521 ATAAAACTCC TGCTCTATTT TTCCCTCCAC CCATCTAGTC CCTGGAGCTG CACTTGTGGG AGGCATCCTT GAGGCCTATC 001600 001601 GCCTCTTACT CCTCATATCC AACACATCAC CAAATCCCAC AAATTCTGCT TCTTGAATCT GAGTCAAGCT ACTTCTTTTC 001680 001681 CCATTACCAC CATCTCCACT TATGATCAGG CCCCTAGCAG GCCAACGTCA TTGAAACCCA AATGCTACTG CCTTTGGCCA 001760 001761 TTCCTCTCTC TCAGATCTGC GCCTCCAGGG CTGAAATCAC ATCTCAATTC TTAATGAGAT GTCTGCTTCC TTCACTGAAG 001840 001841 GGACTTTACT AAGTGTTTCA TTGCAAGTTT TCTTTAAATA GCCAGGCTCT CAGAGCCATT TCAAATAGGG TTTTATGTTC 001920 001921 CTAAATTCAG TTAGTTCTCA ACATTTGAGA CCAATTCTTG CAGCAAGGTG GAGAATAACT CTCATCTGTG AAAGAAAAGC 002000 002001 GGTTCAATAA AGCTTGATAA GCCTTTTGTA TCCGG |
Predicted Small Protein
Name | NONHSAT071569_smProtein_428:541 |
Length | 38 |
Molecular weight | 3964.4217 |
Aromaticity | 0.108108108108 |
Instability index | 42.4108108108 |
Isoelectric point | 5.35382080078 |
Runs | 5 |
Runs residual | 0.0446317877511 |
Runs probability | 0.0322381204734 |
Amino acid sequence | MVSSQGHFCPPGHVWQCLEIFLTSQLVGAGGGGYERD |
Secondary structure | LLLLLLLLLLLLHHHHHHHHHHHHLEELLLLLLLLLL |
PRMN | - |
PiMo | - |