NONHSAT071569

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT071569

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2035 nt

Genomic location

chr2+:71916293..71918581

Exon number

2

Exons

71916293..71918067,71918322..71918581

Genome context

Sequence
000001 TCTCAGGCTG CTGTGCGGCT GGTTGCAGAG GGCCATTCTA GAAGAGTGGT TCGCTAATCC AGGAGCCAAA TGGGAAAGGT 000080
000081 CTGAAAGGCA GGGCTCAGGG TGATTCATCC ATTCATCCAT CCATTCATTC GCGCATTAAA GAAATATATA TATCATATAT 000160
000161 GCATTGGGGG GGCTATCTGT GTACCAGGCA GGGTGGTAGG CTCTAGAGAT ACAATCTTGA GTAAGATAAA CATGGTTCCC 000240
000241 ACCCTCCTAG AGCTCACAGT TGAGTAGAAG AGGCAGATAA GTAGATGGGC AATTACAATA CACTGGTGGA TGATGAGCAG 000320
000321 GAGCTGTGGA GTCAAGAGCA GGGATGGAAA AGACAATAGA GGGAGCAGTA GTTCAAAACC AGAAGCTGGT TCAAAGATCT 000400
000401 CTAGGAGTTG CTACATGGGC ATGGGGCCAT GGTTTCCAGC CAGGGGCACT TTTGTCCTCC AGGGCACGTT TGGCAATGTC 000480
000481 TGGAGATATT TTTGACTTCA CAACTAGTGG GGGCAGGGGG TGGTGGTTAT GAGAGGGACT GAGGCACCGT TAGAAAGGTT 000560
000561 TTCTCCCCAG TAAAAAGGGG CACAAAAGGA GACACATCCT CATCTTCTGC CTCTTAATAT TATGGAACAA TGTAATGACT 000640
000641 GGGGCTGTGG CTGCCATCTT GTGATCCTGA GGCGATCAGC CTGAGGAAGA AAGCCAGCAC ACAGAGGACG GCAGAGGAAG 000720
000721 TGGGGAGGAC CTGGTTCTTG GTGAAGCTAT TGAGGAAGAA CCAACCCTGA AGTCACCCTA CCACCAGAGG AGACAGCTTG 000800
000801 TGACTCAGGG CCATACATTC CTTGTAGCGT AAGCCATCTT TGGTTGGGTC CTGTGTTACC CACAGCTCCA AGCCTCCTTG 000880
000881 CCGGCGAATT TCATTCTGCT CCTCTGAAAC CGGTTTTCAC TGCCATCTGC AATAACCACG GCTGCCGTGC ACAGGCACCA 000960
000961 CATCTAAGAC ATCATACGTT TATTATTTAT TATAGCAATT TTCCCACAGA TGGCAGTAAA GTGTTTTGTT CTAATAAAAT 001040
001041 CAGTGTGTTA CAGTAGTTTT CTGATAGAAG TAAATTACCT TGAGGAAGGG GCACCTTTTT CTAATTCACA CAAGGGCACA 001120
001121 ATCTAGCCTT GGTGGTTAAA TCTGTGGGCG CTCACCCTTC ACGACTCAGC TGTGGCTGAC AGCACGGACG TTCTCTGCTT 001200
001201 CTTGATCAAC CTTCTGTCTG TACCCAGCTT CTGTGATACC ACAGTCGCCT GGTGGTCCTC CTCTCCCTGT GGCTTGGCGT 001280
001281 CCCTCTCTGT TCGTCTGTGA TGTTCCCCAG GTCTCTTTCC CTGGCGCTGT TCTCGTATTG TATGGCTCCT AGGCACCCTC 001360
001361 ACCTGCCCCA CTTTCTCTGC CTTCTACAGG TGAATGAACC CGGAATCCCT CACTGTAGCC CAGTTTCTCC CCTCCGCTGC 001440
001441 AGGCGCCTTA GTGTACTGCT TACGCACTGG CACTATGAAC TCAAACCCTC CCCCTCAAAG TCTCCATCCT CCACCCCATT 001520
001521 ATAAAACTCC TGCTCTATTT TTCCCTCCAC CCATCTAGTC CCTGGAGCTG CACTTGTGGG AGGCATCCTT GAGGCCTATC 001600
001601 GCCTCTTACT CCTCATATCC AACACATCAC CAAATCCCAC AAATTCTGCT TCTTGAATCT GAGTCAAGCT ACTTCTTTTC 001680
001681 CCATTACCAC CATCTCCACT TATGATCAGG CCCCTAGCAG GCCAACGTCA TTGAAACCCA AATGCTACTG CCTTTGGCCA 001760
001761 TTCCTCTCTC TCAGATCTGC GCCTCCAGGG CTGAAATCAC ATCTCAATTC TTAATGAGAT GTCTGCTTCC TTCACTGAAG 001840
001841 GGACTTTACT AAGTGTTTCA TTGCAAGTTT TCTTTAAATA GCCAGGCTCT CAGAGCCATT TCAAATAGGG TTTTATGTTC 001920
001921 CTAAATTCAG TTAGTTCTCA ACATTTGAGA CCAATTCTTG CAGCAAGGTG GAGAATAACT CTCATCTGTG AAAGAAAAGC 002000
002001 GGTTCAATAA AGCTTGATAA GCCTTTTGTA TCCGG
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Predicted Small Protein

Name NONHSAT071569_smProtein_428:541
Length 38
Molecular weight 3964.4217
Aromaticity 0.108108108108
Instability index 42.4108108108
Isoelectric point 5.35382080078
Runs 5
Runs residual 0.0446317877511
Runs probability 0.0322381204734
Amino acid sequence MVSSQGHFCPPGHVWQCLEIFLTSQLVGAGGGGYERD
Secondary structure LLLLLLLLLLLLHHHHHHHHHHHHLEELLLLLLLLLL
PRMN -
PiMo -