NONHSAT071264
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT071264 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2105 nt |
Genomic location |
chr2-:67350489..67442451 |
Exon number |
8 |
Exons |
67350489..67351995,67353378..67353522,67373700..67373790,67375469..67375569,67391669..67391719,67430248..67430305,67432641..67432695,67442360..67442451 |
Genome context |
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Sequence |
000001 CTTAAATCTA AAAAGAGCCT CTCACCTGAG GCCTTCACCT GAGAGCTGGA GCCTGTGCGA TGGATTATCT GGACAGGGAC 000080
000081 CCCAATGAAC AGGGCTCTGC TGGAGTGAGG AAGCTGACTG AGGGAAGAAC CAGAAGGCTG CCAAAATACA ATTGTGTGCC 000160 000161 TTTAAAGGAA ATAACAACAA GAATTAGGAG CGCCCTGGAG GCAAGTTTCA GAAGCTGGGA AGTTTAAGAT CAAGGCGCCA 000240 000241 GCAGATTTGG TGTCTGATGC TCTCCACACC AGTCCATGGC TGCCGTGGTG TCAATGATTC AGGACTGTTT TTTTAATCTC 000320 000321 TTCAATTCCT CTTCCAGAGA CATGAAGTTA AAACCAGGAA AAATCAAGAC AGAACAACAC ATCCTGTGGT GTCTGGACAG 000400 000401 AGCTGACCCT GTGCAACACA GACCTCAATG GACCCTGATA TCTTCTTGGT TAGTTCCATG ACTTGACTAA ATGGGGGCTT 000480 000481 GGCTATCTTG ACAGAGTCTC ATTCCAGCCC TGTTCACATG CTCGGTGGTT GTGGAAATAC AGACTCCAAG TCATTCAACA 000560 000561 CTTTTAGCAC CTTCCTGAGA CCATTTACTC TCTAAAATGG AGTCTACCTG CTTCCACCTG AGAGCTAAAG AACCTTCTCT 000640 000641 TTGATCAAGC TGAGTTCCAG AGTTCCAAGT TTCCCAGGAT TCAGAGATCC CTGGCCCAGC TGTGATATGC AGTCTCAAAA 000720 000721 CACAAAACAT CTGGAGAGAT GATATGAACA GTTCATCTTT CCCTATTTAT ATTTGAAGGC TAAGGCAATG TTTATGGAAT 000800 000801 AAAGAATTTG TTTAAATGAA TGTCTGAACA TTATGAATTC CTTGTTATAC TTTATCTGGC TTCACAATTG ATGTAGTGAA 000880 000881 CCAAGATCTC TCTATACATA TACTCACATG CATACACATA CACATAGGCT TATAGTCATA AAGCTATATA GTCATATATA 000960 000961 CATGTATCTA TATATCAAAA AAGAGATTGT TATTTTTCTT TATGTACCTA GGGAAATCCC TGAACCTATT AAGGCCACTA 001040 001041 TATTCATTTC TCTAAAGTCT AAAAGCAGAC TGGAAGGATG GAATATGAGT ATAACACGAA AGTAATATTT TTCACAAAGT 001120 001121 CATGGCTATT AAGAACCTTA TAGTCTTTGA GTGGAGTGTA TAATTTGAAA TTAAAGTTTC ATAACTGAGT ATCCTTCTTT 001200 001201 TTAGAAGAAA AATGTTCTCA TAAATCTGTT ACCCAAAATG CTTTTGAAAG AAAATTTACC ATTTTCTTCA ACTTTAAAAT 001280 001281 CATACTTGCA AGGGAAGCTC TGTGCAGAGA TGTTTGGCAT AAATATGAAT GACAATATAT AAAAACTATT ACCACACTAC 001360 001361 TAAAAAATGT TGGGCAGCTT TGACCTGGTT ATTTGATTGA ACTTTCTGAA TCTGATTTGT CAACTGAAGA CAAGTAAAAG 001440 001441 TTTTTTTACA AATTCTATCC TTAGCCTCTC AATTAATCTC AAATATTTGT TCAGAGAAAT AATTGAAAAT TCTGACTGTA 001520 001521 TCCTGACTGA AATGTGGATC ACTGGGGGCC TCAAAGCTTC AGTGTGTTTA GTTCCCTATG GTTTTGAGGC ACATGCCCTA 001600 001601 TGTGAACCTT TTGAAGGACA GAAAAATTCA TAACTGACTA GCAATTGGTT AACTTTAGTT AAAAAGTGAA ACACCTACTC 001680 001681 TAGTGGTGCA AAAGATGTCT GCAAAGGGCA AAATCTTCAG CTTTGAAAGG CATTCAGCAA TGTCAATAGA CTAGCACTTG 001760 001761 AGAGTCACCT AAAATTTATT TGTATTACTT TTCACCCAAT TTTAAAGAAG AATATTTCTA AGATAAAAGC TTAAAACTTT 001840 001841 TTAATTAAAA AAAAAAACTA AACTCAGTAC TCCTAAGCCT TCATAGATAT ATACTTCAGT ATCTTGCATG ACATTGAAAG 001920 001921 CTCTAATAAC CAAATTCTTT CCTGACTCCT AATTATGTGT CCTTGTTCTT CTGTTTAACT CTAAAGTAAC ATTTTGTGTC 002000 002001 TATTTGTGTA TATGCATGTG TACACATTTG TGTGAGTTCA CAAATGATTA CTCTGATGAA TGTTAATTTA TATCAATCTA 002080 002081 ACCAAAATAA AATTAGAGAA ATCTT |
Predicted Small Protein
Name | NONHSAT071264_smProtein_275:460 |
Length | 62 |
Molecular weight | 7115.2681 |
Aromaticity | 0.0983606557377 |
Instability index | 52.7262295082 |
Isoelectric point | 8.80340576172 |
Runs | 7 |
Runs residual | 0.0380629357452 |
Runs probability | 0.0483004012416 |
Amino acid sequence | MAAVVSMIQDCFFNLFNSSSRDMKLKPGKIKTEQHILWCLDRADPVQHRPQWTLISSWLV P |
Secondary structure | LLHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLHHHHHHHHLLLLLLLLLLLEEEEEEEEL L |
PRMN | - |
PiMo | - |