NONHSAT070987
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070987 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2041 nt |
Genomic location |
chr2-:61989994..61992034 |
Exon number |
1 |
Exons |
61989994..61992034 |
Genome context |
|
Sequence |
000001 aaaaaaaaga agaaaaTCTT GCATCAACAC TCCTACGCAA ATGTCTCTGC GATTCATTCA ATAACTGGTC ATCAACCTCC 000080
000081 ACCCCCAAAC ACAACTGTCA GGTCTATGTC GTTCCCAAGT AGGCAGGTCG GTGACCCTCA CGAGGAAAGG GAGTGTGTGG 000160 000161 GCCTGTCTGT CTCCAAGGCC TCGCCACACA ACAGTCCCTC AGCGGTTTCG CTGTTATGCG AGGTCTTTAC CCCGGGATGT 000240 000241 TCCGGGGAGT CAATCCCTCC CCGCCCTAGG CTACGCCGGG AACGGCCGGC AGCTGATCCG AACTTTCTGC CGGGCCTCCT 000320 000321 TTCTCATTCC TCGGGTTCGG CAGTACCACA CCCGCCACGC GATTGGTATC GTAGGAGGGC CTTGTTTGAC CACGGCGACT 000400 000401 CGTTACTTAT GGGTGAGGAT TTACGCGCGT CCTTCCGGAG GCCACACATC ACTTCCCTTG CTCCGCCCAG TTTAGAGACC 000480 000481 TGCGCACCCG CCAGGGCGTG AGAGAGACTA CCCGGCGCGC GGTGACGCCC CAGCTCGCCC ACACTTCTGC CCCGTCCCGC 000560 000561 CCATCGTTGC GCGGCCGCGG GCCAATCAGA TCGTGCCTTT ACTCTACGCC CCCGGCTCCC CCGAACTTCT GTCCTCATTT 000640 000641 CAGGGCGACT TTGGGAACAC AATAGTCGAC TCGCCGACGT TCCCTTAGAC GCGTTGCCAT ACGTCGTCAC CCATAGAAAC 000720 000721 GGCTTTCCGC GGGGCAGACT CCAAGTCTCG CCTGTGTGAG CGGGCAGGGG TAGCAGGAAA GGCTGTTTTT CATTTCCAAG 000800 000801 AGAAAACCGT CACCCCGCCC ACCTCGAACC TCCTCCCAAC ATCTCAGGAT AGAAACGCCG CGCTCAGGTG AATGAGAAAT 000880 000881 GTTCTGATAC AGGAAAGAGG AGTTCGTGTT TCTTTCAGAA GGTGACCGTT TTCCTCCTTC TGAGGTCACG AGCTGTCCGT 000960 000961 CCGATGCCCA GAATTCCGAG GCCTGATGTG GCGTGTTTCC GGTAGCTGGG CTCCTCGGAG AGCTGTGGGA AGAGGCGCGG 001040 001041 GCGACCGGGG GCGTCAGCGA GCCCTGTCTT CGCCTGCCTT CGCCGGCGTG GACTCTTCCC AGTGCCCGTC TTCCCCCGCG 001120 001121 AAGTAATAGT GTCCTGTATT TCCTGACTGT AAGAAGAATA GTGCTTTTAA AAAATGCCTG CTCCCTGTAA TAGCAGCAGT 001200 001201 AGTTCGAGAG TACATACATG TTTATAAAAG AAACTTAAAC TCTCATTCTT GCCACAGTGG ATAATACTAT TAACATATTG 001280 001281 CTACATAAAT TTAGAATTTT CATACATACA CGTAAAGGTG TTTGGTTTTT TAAAACAGAA AAACGTAAGC GCGTTATCTC 001360 001361 CCAGTAATGT CTTTGCAGGT AAATTAAAAT AATtacatat atatttatat ttatatatat atattttttc taagagatgg 001440 001441 ggttgttgcc caggctggtc ttgacctccc gggctcaagt gatactccca cctcaggctc ccaaagtgct gggactgtgg 001520 001521 gcatgaacca ccgggtccag ccTACAGAat catttttaat ggctgtatgg atatcataat ttgttcaacc agtccctaag 001600 001601 ttgttggact tttcaggtat tgacagcttt tcaggtctac aatcctagat gaatattctt atatgtaaat ctgtacatgt 001680 001681 ccctgattat ttttttacaa taaagtcata gaaataaaat tactggatca aggaaaatgc acgtttgtaa gactctaaat 001760 001761 gatattacca gaccctcccc tagaaaccta tttactactt ttccattaac agtatgagaa ggaatatgct ctctgcatct 001840 001841 ccttgctaat cttagatatt gtcagtcttc gtgatcttta tcatctcttt aaaaaagact cgttttaatt tgcattttgt 001920 001921 tgcctaagtg taaaactgaa catctttcat ataattattg gctctatttt tgtgaattac tagttcatga cttctgccta 002000 002001 tttttaaaat gaaatattca cattttagaa attacaagtg c |
Predicted Small Protein
Name | NONHSAT070987_smProtein_1436:1525 |
Length | 30 |
Molecular weight | 3138.8554 |
Aromaticity | 0.0344827586207 |
Instability index | 51.0 |
Isoelectric point | 12.0084838867 |
Runs | 7 |
Runs residual | 0.0418103448276 |
Runs probability | 0.0430262194969 |
Amino acid sequence | MGLLPRLVLTSRAQVILPPQAPKVLGLWA |
Secondary structure | LLLLHHHHLLLLLEEELLLLLHHHHLLLL |
PRMN | - |
PiMo | - |