NONHSAT070885
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070885 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2005 nt |
Genomic location |
chr2-:60431234..60433655 |
Exon number |
2 |
Exons |
60431234..60432947,60433365..60433655 |
Genome context |
|
Sequence |
000001 GCCCATGCAA AAACCCCATT CGAAGGTCAC CAGCATCAAA GACTAAAATT GATAAATCCT CGAAGATGAG GAAAAACCAG 000080
000081 CACAAAAAGG CTGAAAATTC CAAAAACCCG AATGCCTCTT CTCCTCCAAA GGATCACAAC TCCTTGCCAG CAAGGGAACA 000160 000161 AAACTGGACA GAGAATGAGT TCGATGAATT GACAGAAATA GGCTTCAGAA GGTGGGAAAT AACAAACTCC TCTGAGCTAA 000240 000241 AGGAGCATGT TCTAAAAGCT AAGAACCTTG ATAAAAGGTT ACAGAAAGTG TAGCAACCCC AAAACACATA ATTGTCAGAT 000320 000321 TCACCAAGGT TGAAATGAAG GAAAAAATGT TAAGGGCAGC CAGAGAGAAA GGTCAGGTTA CCTTCAAAGG AAAGCCCATC 000400 000401 AGACTAACAG TGGATCTCTC TGCAGAAACC CTATAAGCCA GAAGAGATTG GGGGCCAATA TTCAACATTC TTAAGGAAAA 000480 000481 GAATTTTCAA CCCAGAATTT CATATCCAGC CAAACTAAGC TTCATAAATG AAGGAGAAAT GAAATCCTTT ACCCATGAGC 000560 000561 AAATGCTGAG GGATTTTGTC ACCACCAGGC CTGCCTTACA AGGGCTCCTG AAGGAAGGAC TAAATATGGA AAAGCAAAAC 000640 000641 CAGTACTAGC CACTGCAAAA ACATACCAAA ATGTAAAGAC TGTTGACACT ATGAAGAAAC TGCATCAACT AACGGGTAAA 000720 000721 ATAACCAGCT AGCCTCGTAA TGACAGGATC AAATTCACAC ATAACAATAT TAACCTTAAA TGTAAATGGG CTAAATGCCC 000800 000801 CAATTAAAAG ACACAGACTG GCAAATTAGA TAAAGAGTCA AGACCAATCA CCATGCTGTA TTCAGGAGAC CCATCTCATG 000880 000881 TGCAAAGACA CACATAGGCT CAAAATAAAG GGATGGACAA ATATTTACCA AGCAAATGGA AAGCAAAAAA AAGCAGGGGT 000960 000961 TGCAATCCTA GTATCTGATA AAACAGACTT TAAACCAACA AAGATCAAAA ATGACAAAGA AGGGTATTAC ATAATGGTGA 001040 001041 GGAGATCAAT GCAAGAAGAA GAGCAAACTA TCCTAAATAT ACGTGCATCC AATACAGGAG CACCCGATTC ATAAAGAAAG 001120 001121 TTCTTAGAGA CCTACAAAGC GACTTAGACT TCCACACCAT AATAGTGGGA GATTTTAACA CCCCACTGTC AATATTAGAC 001200 001201 AGATCAACGA GACAGAAAAT TAACAAAGAT ATTCAGGACT TGAAATCAGC TCTGTACCAA GTGGATCTAA TAGACATCTA 001280 001281 CAGAATTATC CACCCCAAAT CAACAGAATA TACATTCTTC TCAGCACCAC ATAGCACTTA TTCTAAAATT AACCACATAA 001360 001361 TTGGAAGTAA AACACTACTT AGCAAGTGTA AAAGAATGGA AATAATAACA AACAGTCTCT CAGATCACAG TGCAATCAAA 001440 001441 TTAGAACTCA GGATTAAGAA ACTCACTCAA AACTACACAA CTACATGGAA ACTGAACAAC TTGCTCTTGA ATGACTACTG 001520 001521 GGTAAATAAC GAAATTAAGG CAGAAATAAA TAAGTTCTTT GAAACCAATG GGAACAAAGA CACAACATAC CAGAATCTCT 001600 001601 GTGACACAGC TAAAGCAGTG ATTAGAGGGA AATTTATAGC ACTAAATGCC CACATGAGAA AGTGAGAAAG ATCTAAAATG 001680 001681 ACATGCTAAC ATCACAATTA AAAGAACTAG AGATGCAAGA GCAAACACAT TCAAAAGCTA GCAGAAGGCA AGAAATAACT 001760 001761 AAGATCAGAG CAGAAGTCAA GGAGAGAGAG ACACAAAAAA CCCTTCAAAA AATCAATGAA TCCAGGAGGT GGTTTTATGA 001840 001841 AAAGATTAAA AAAATAGATA GACCACTAGC CAGACTAATA AGAAAAAAGG GAAGAATCAA ATAGACACAA TAAAAAATGA 001920 001921 TAAAGGGGAT GTCACCACTT ATCCCACAGA AATACAAATT ACCATCAGAG AATACTATAA ACACATCTAT ACAAATAAAC 002000 002001 TAGAA |
Predicted Small Protein
Name | NONHSAT070885_smProtein_65:292 |
Length | 76 |
Molecular weight | 8867.7693 |
Aromaticity | 0.0533333333333 |
Instability index | 62.5826666667 |
Isoelectric point | 9.39605712891 |
Runs | 11 |
Runs residual | 0.0022695035461 |
Runs probability | 0.0446837211544 |
Amino acid sequence | MRKNQHKKAENSKNPNASSPPKDHNSLPAREQNWTENEFDELTEIGFRRWEITNSSELKE HVLKAKNLDKRLQKV |
Secondary structure | LLLLHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHLLLEEEEELLHHHHH HHHHHHLHHHHHHLL |
PRMN | - |
PiMo | - |