NONHSAT070885

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT070885

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2005 nt

Genomic location

chr2-:60431234..60433655

Exon number

2

Exons

60431234..60432947,60433365..60433655

Genome context

Sequence
000001 GCCCATGCAA AAACCCCATT CGAAGGTCAC CAGCATCAAA GACTAAAATT GATAAATCCT CGAAGATGAG GAAAAACCAG 000080
000081 CACAAAAAGG CTGAAAATTC CAAAAACCCG AATGCCTCTT CTCCTCCAAA GGATCACAAC TCCTTGCCAG CAAGGGAACA 000160
000161 AAACTGGACA GAGAATGAGT TCGATGAATT GACAGAAATA GGCTTCAGAA GGTGGGAAAT AACAAACTCC TCTGAGCTAA 000240
000241 AGGAGCATGT TCTAAAAGCT AAGAACCTTG ATAAAAGGTT ACAGAAAGTG TAGCAACCCC AAAACACATA ATTGTCAGAT 000320
000321 TCACCAAGGT TGAAATGAAG GAAAAAATGT TAAGGGCAGC CAGAGAGAAA GGTCAGGTTA CCTTCAAAGG AAAGCCCATC 000400
000401 AGACTAACAG TGGATCTCTC TGCAGAAACC CTATAAGCCA GAAGAGATTG GGGGCCAATA TTCAACATTC TTAAGGAAAA 000480
000481 GAATTTTCAA CCCAGAATTT CATATCCAGC CAAACTAAGC TTCATAAATG AAGGAGAAAT GAAATCCTTT ACCCATGAGC 000560
000561 AAATGCTGAG GGATTTTGTC ACCACCAGGC CTGCCTTACA AGGGCTCCTG AAGGAAGGAC TAAATATGGA AAAGCAAAAC 000640
000641 CAGTACTAGC CACTGCAAAA ACATACCAAA ATGTAAAGAC TGTTGACACT ATGAAGAAAC TGCATCAACT AACGGGTAAA 000720
000721 ATAACCAGCT AGCCTCGTAA TGACAGGATC AAATTCACAC ATAACAATAT TAACCTTAAA TGTAAATGGG CTAAATGCCC 000800
000801 CAATTAAAAG ACACAGACTG GCAAATTAGA TAAAGAGTCA AGACCAATCA CCATGCTGTA TTCAGGAGAC CCATCTCATG 000880
000881 TGCAAAGACA CACATAGGCT CAAAATAAAG GGATGGACAA ATATTTACCA AGCAAATGGA AAGCAAAAAA AAGCAGGGGT 000960
000961 TGCAATCCTA GTATCTGATA AAACAGACTT TAAACCAACA AAGATCAAAA ATGACAAAGA AGGGTATTAC ATAATGGTGA 001040
001041 GGAGATCAAT GCAAGAAGAA GAGCAAACTA TCCTAAATAT ACGTGCATCC AATACAGGAG CACCCGATTC ATAAAGAAAG 001120
001121 TTCTTAGAGA CCTACAAAGC GACTTAGACT TCCACACCAT AATAGTGGGA GATTTTAACA CCCCACTGTC AATATTAGAC 001200
001201 AGATCAACGA GACAGAAAAT TAACAAAGAT ATTCAGGACT TGAAATCAGC TCTGTACCAA GTGGATCTAA TAGACATCTA 001280
001281 CAGAATTATC CACCCCAAAT CAACAGAATA TACATTCTTC TCAGCACCAC ATAGCACTTA TTCTAAAATT AACCACATAA 001360
001361 TTGGAAGTAA AACACTACTT AGCAAGTGTA AAAGAATGGA AATAATAACA AACAGTCTCT CAGATCACAG TGCAATCAAA 001440
001441 TTAGAACTCA GGATTAAGAA ACTCACTCAA AACTACACAA CTACATGGAA ACTGAACAAC TTGCTCTTGA ATGACTACTG 001520
001521 GGTAAATAAC GAAATTAAGG CAGAAATAAA TAAGTTCTTT GAAACCAATG GGAACAAAGA CACAACATAC CAGAATCTCT 001600
001601 GTGACACAGC TAAAGCAGTG ATTAGAGGGA AATTTATAGC ACTAAATGCC CACATGAGAA AGTGAGAAAG ATCTAAAATG 001680
001681 ACATGCTAAC ATCACAATTA AAAGAACTAG AGATGCAAGA GCAAACACAT TCAAAAGCTA GCAGAAGGCA AGAAATAACT 001760
001761 AAGATCAGAG CAGAAGTCAA GGAGAGAGAG ACACAAAAAA CCCTTCAAAA AATCAATGAA TCCAGGAGGT GGTTTTATGA 001840
001841 AAAGATTAAA AAAATAGATA GACCACTAGC CAGACTAATA AGAAAAAAGG GAAGAATCAA ATAGACACAA TAAAAAATGA 001920
001921 TAAAGGGGAT GTCACCACTT ATCCCACAGA AATACAAATT ACCATCAGAG AATACTATAA ACACATCTAT ACAAATAAAC 002000
002001 TAGAA
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Predicted Small Protein

Name NONHSAT070885_smProtein_65:292
Length 76
Molecular weight 8867.7693
Aromaticity 0.0533333333333
Instability index 62.5826666667
Isoelectric point 9.39605712891
Runs 11
Runs residual 0.0022695035461
Runs probability 0.0446837211544
Amino acid sequence MRKNQHKKAENSKNPNASSPPKDHNSLPAREQNWTENEFDELTEIGFRRWEITNSSELKE
HVLKAKNLDKRLQKV
Secondary structure LLLLHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHLLLEEEEELLHHHHH
HHHHHHLHHHHHHLL
PRMN -
PiMo -