NONHSAT070643

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT070643

Source

NONCODE4.0

Same with

,

Classification

sense

Length

490 nt

Genomic location

chr2-:50724809..50734078

Exon number

2

Exons

50724809..50724852,50733633..50734078

Genome context

Sequence
000001 TGACTGTGCC TATTTATGAC AGCAGGTTAA TTCACTTGTT ATGGATCAAT GCGTAGGATT AAAGATTCTT AAATGGTCAC 000080
000081 ACCTGAATGT TTGTAAAAGT TGTCATTTTC CTTGCTTGCT ATGACTCTAA TGGGCTTGAA AATTGGTCCA GCCCGCCTCT 000160
000161 TCTCTGTTTC ctttctctcc ctcctctctc tctttcttcc tttcttcttt ctctcctctc tctccctcac cttcccccct 000240
000241 tgtctctttc tctcactctc tGTGAGGTTC ATTTGCTTGA CTGATTCTGA GTGTCCATAA TGACTGTTTG GCATATTCTA 000320
000321 CAGGCAAAGG TCCCGAGACT CTTTTTGCTG GCTATAACCT CAATGATAAC GAGTGGCACA CAGTGCGTGT AGTTCGGCGT 000400
000401 GGAAAAAGTT TAAAGTTAAC AGTGGATGAC CAACAGGCCA TGACAGGTCA AATGGCAGGT GATCATACTA GGCTGGAGTT 000480
000481 CCATAACATA
[back to top]

Predicted Small Protein

Name NONHSAT070643_smProtein_86:283
Length 66
Molecular weight 7155.5006
Aromaticity 0.0923076923077
Instability index 48.02
Isoelectric point 4.86383056641
Runs 9
Runs residual 0.0118269230769
Runs probability 0.0750161926633
Amino acid sequence MFVKVVIFLACYDSNGLENWSSPPLLCFLSLPPLSLSSFLLSLLSLPHLPPLSLSLTLCE
VHLLD
Secondary structure LEEEEEEEEEEELLLLLLLLLLLLEEEELLLLLLLHHHHHHHHHLLLLLLLLLLLLLLEE
LLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL
LLLLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooooo
ooooo