NONHSAT070142
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT070142 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
837 nt |
Genomic location |
chr2-:38020850..38021686 |
Exon number |
1 |
Exons |
38020850..38021686 |
Genome context |
|
Sequence |
000001 aaaagaaTCT GATgctcagc tgtacaaagt gcagttagtg aacagcctcc atcggcagtg ccttcagatt gcatcctggg 000080
000081 cattggaact gattccacgc tctgctgcag ctcccaggca atgactgagc ttggtggggg cactagggtg tgtccatttc 000160 000161 tgcccaatgt ggaactcttc tagtgaccat ctgtgttcta gggtttccat tgggttgagc tgaggttttc ctggccccat 000240 000241 tttgtttcct cttcccttgc atttcagata tcagacattc atcacagtct gaagactttc tatgccccat gctactctct 000320 000321 ccccttttat ctttcacaga cttcacttcc caataaatct cttacactcc tatctccacc ccctgagtct gtttcccaga 000400 000401 gaatctgtac taacacaCCT ACACAATGCC TCGGGCAGAT ATATTATCTT CCTTAAGGCA TGATGGAGAG ATTTCATTAA 000480 000481 CTTGAATGCA CAGTGTCTCC TACCACAACT GTAGCCTTGT TGAAATGCCC CCCGAAGAAA GCCATTGGAT CCTCATGTTG 000560 000561 TTCATGCAAA AATGCCATCT CATGGGGGTG GCTAGACCAG AGAATGGGGT ATTCTAAGTC AGCATGCCCG ACACTGGCTC 000640 000641 TTTGCAAGCT TGGATCACAG CCTGAAAGAA ACCTGAGCAC TCCTCCATGG GTAGGGAGGA ACACTGAACA CATTTGGAGT 000720 000721 TGATAAGGGA AACAACTGCA TTTGAATGAG GTTTAAGAGG GTTCTTGGAT GAGACCCTTA AGAAGTCTAG TGCTTTTCTT 000800 000801 TCACTTTGGC ATTTTACATT TTTTGGCACA AGATATG |
Predicted Small Protein
Name | NONHSAT070142_smProtein_485:616 |
Length | 44 |
Molecular weight | 5016.8647 |
Aromaticity | 0.093023255814 |
Instability index | 76.2581395349 |
Isoelectric point | 5.99053955078 |
Runs | 7 |
Runs residual | 0.0054873268879 |
Runs probability | 0.0300426476898 |
Amino acid sequence | MHSVSYHNCSLVEMPPEESHWILMLFMQKCHLMGVARPENGVF |
Secondary structure | LLLEELLLLLEEELLLLHHHHHHHHHHHHHHLLLLLLLLLLLL |
PRMN | - |
PiMo | - |