NONHSAT070014

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT070014

Source

NONCODE4.0

Same with

,

Classification

sense

Length

688 nt

Genomic location

chr2+:33701664..33741855

Exon number

4

Exons

33701664..33701774,33736777..33736909,33740077..33740273,33741609..33741855

Genome context

Sequence
000001 AAGACTCAGA GCCCCAGCTT GAAGGAAACA GCTGCTCTCG GCGTGCTCCG GCACTTGGCA GCTGGACAGG CAGAGTGCTG 000080
000081 ATGTGAAAAA TACCACGACA AAACCACCCT AGTTCTCCAA AATACTTATC ATTCAGGTTG AATAAACCAG TTCTACAGAC 000160
000161 TGCTTCTTCC ATGCATTTCC CAATGATGCT AGCTGCCCTT AAAATTCTTT CAGATTTGGA ACTGTATCTG TATGGAAACA 000240
000241 ACAGAGTTTT CTTGAAGTAC AACTAAGGAC AGGTCACCAC TAGGCACTAA CATCGCTGAC TTGCATGATT ATGGAGATGG 000320
000321 TCTATCTGAT GCTGAAAATG TCTCTAGTTT TTTGACAACG GCTAAATAAC CATGGGATCA AGTGGCCTTG GGAAAGCAGC 000400
000401 AACATTAGAT GAACTGCTGT GCACTTGCAT TGAGATGTTT GATGACAATG GAGAGCTGGA TAATAGTTAT TTGCCAAGAA 000480
000481 TAGTTCTACT GATGCACCGA TGGTATTTAT CTTCCACTGA ATTGGCAGAA AAACTTCTCT GCATATATCT TTTCAACTAC 000560
000561 TGTGTAATTT TTACAATCAT AAATCAAGCT CTGTATTTAG ATAGAGTGTC TATCCAAAGC CAGTAAATTA AGATGAATAA 000640
000641 ATAGTCTTTG GTTATCCAGC TGTTTTGTGA ATATATATAG ATGTCTAG
[back to top]

Predicted Small Protein

Name NONHSAT070014_smProtein_371:625
Length 85
Molecular weight 9602.0671
Aromaticity 0.107142857143
Instability index 41.4857142857
Isoelectric point 4.45074462891
Runs 11
Runs residual 0.0030330603579
Runs probability 0.0541423776717
Amino acid sequence MGSSGLGKAATLDELLCTCIEMFDDNGELDNSYLPRIVLLMHRWYLSSTELAEKLLCIYL
FNYCVIFTIINQALYLDRVSIQSQ
Secondary structure LLLLLLLHHHHHHHHHHHHHHHHLLLLLLLLLHHHHHHHHHHHHHLLLHHHHHHHHHHHH
HLHHHHHHHHHHHHHLLLLEELLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHH
HHHHHHHHHHHHHHLLLLLLLLLL
PiMo ooooooooooooooooooooooooooooooooooooooooooooooooooooooooTTTT
TTTTTTTTTTTTTTiiiiiiiiii