NONHSAT068691
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT068691 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2344 nt |
Genomic location |
chr2-:2877827..3108805 |
Exon number |
7 |
Exons |
2877827..2879459,2879967..2880083,2948593..2948650,2949357..2949454,3108074..3108217,3108341..3108434,3108606..3108805 |
Genome context |
|
Sequence |
000001 AAAGGGTCTG TGCTGAGGAG GATTAGTAAA AGAGGAAGGG ACGCCTCTTT GCAGTTGAGA CAAGAGGAAG GCATCTGTCT 000080
000081 CCTGCTCGTC CCTGGGCAAT GGAATGTCTC CGTGTAAAAC CCGATTGTAT ATTCCATCTA CTGAGATAGG GGAAAACCGC 000160 000161 CTTAGGGCTG GAGATGTGAC AGGCGGGCAG CAATACTGCT TCAATAGATA CTAAGGGAAC TCAGAGGCCA GCGTGGATCG 000240 000241 TGGATCCTCC GTATGCTGAA CACCGGTCCC CTGGGTCCCC TTTTTCTTTC TCTGCCGTGG CTGTCACCCT GGGAATGAGT 000320 000321 CTGCCACGGT CCCGGGAATC CTCTCCCTGC TCTGGGACCC TGGGTTTTCT GCGTCCTGTA CTCTCTGTCT TTTGTTCATT 000400 000401 CATTTGTTTT TTGTTTATGC TCTTTTTTGA GTCCAGTCTT TCAGCAGTTT GAACATGTGC GTGCTTTTTT TTTTTTTTTT 000480 000481 TTGTCTATTT GTTTTGTTGA TATTTATCCC ACTGGGATTT CTTTGAGCTC AATAGTTTTA CATTAGCACT TTTAACATAT 000560 000561 TTTTCATAGT TATTTTAAAT TGCCATATGA TAGTAGGGCT TCTCCCCTTC CCCCACCTCT ACTGTCCCTT CCCCCTTACA 000640 000641 GGCATGAGGA ACCTTTTCTA TCCCTCCTGC CTCCCCAGAG AAAAAGGCAG GATACCCTGG GGTATGAGGT TTCCTGTAAA 000720 000721 TGCTGGGATC CTACTGCACA GTAGGGTGAT GGCGGTAACA GGAAGGTTTG CGTTTTTCAA AATAGCTGCG AGCACACCAG 000800 000801 GCTGAGTCAG CGGGGGTGCC CGGTGAGCAG CCTGGCAGCT GCCCGTTGTG CATGGGCAGG GGAAGCCAAG GGGCTCAAGC 000880 000881 CAGCCAGACC CTGGGTCCAG GGAGGTGACC TGGGCCACCC TGAGGCCAAG CCGGAGACAC CTGCGAGCCA TGTGCAGCAA 000960 000961 GCTCAGGAGG GCCTCCCTGA CCTGCCTTGG GAAAGTGTCC CTGGGCAGTG CTATCAACCC AGGTGACCCT GCGTGCTCCT 001040 001041 GGCTCAGTGC TTCGGTGCCT GGCCTATGTG GCCAAGGTGG CAGGGCTGCT GGGGGCCCTG CGAGGGCCGA GACCCTTAGG 001120 001121 CTGTAGAGGC TGTGGCACAG CACTGTGGGA TGGGGGAGCT GGCTGCACCC AGGCGGCCTG GGGCTCAGTG GCTTTCTGAA 001200 001201 AGCTTTCAAA GAGGTGAAGT GTGGCCCGTT CACACTGGGG CCAGGACATG GCGACATAGT GAGAGGGGGA GGCCCAGGTG 001280 001281 CAGGGGCCGG AGAGCTTATG CTTAGGGTGC AGTGGGAGGG CAAGGGTTGC CTCGCACATG GGAGACGCCA GGGCCGGGCT 001360 001361 GCGGGTGACA CTGTGGCCAG GCCTTCCTCC CTGGGCCTCA CCCTGAGCTG GGCAGACACT GACCGGGGCT GGCTCTGGCT 001440 001441 CTGGGCGGAG GTGCTGGGGG GCTCACTGCC CAGGTCATCT CCGCAGGGTC AGGGGTCTGA GCTGCTTTTA GCAGCAGCTT 001520 001521 CCCAGACACA CGACGCCAGT TTCCATTTCT CCTTCAGCAT CATTTCTCAG AAATATGGTT CTGTGGCCAT TCACCAACAA 001600 001601 CAGTTGGTGA AATGTGGCTC TGTTTCTGGG GAGCTGGTGA TATTTGGGTT TAAGTCCTGC AGATGACGTG GTGAGGGCTG 001680 001681 GTGGAAGAAA TTTGACAGGA GTGGAGAGAC CCTGGACCTA GACCTCACTG GGCCTTGCAC CCACTGTGGG ACTGTGGTCT 001760 001761 GGCACGGGCA TTTCTGAAGC TGTGGCCACG CCATTGCAGC ACGCATCACT CCTGCACACC CAGATGCAGA GCTCGGTGAG 001840 001841 AACCTCACTG TGGGCAGTGC CAGGCACAGC AGGTCCCACG TATTTGAGAT GCTCAGGAGC CCCAGGGCCT GGAGGGAGAC 001920 001921 TTTTGGGCCC ACATGCCCCA TGTTTGGGAA GGTTTGGGCT TAACCAGGGA ATAACATCAT GCATTTTGCA GCTCCCTTCC 002000 002001 AGCTGCAGAG CCAGACGTTC CGATATGAAG TTGGCTCCGT GCGTAAATCA CAGCAGGTAC TCAAAGCAGT GGTTACCGCT 002080 002081 CTCCTTATTC CTGCTTTCTC TTCCCTGAGT TCAAAAGCCT GCAAAGCCAG TTTTGGGAAA AAAAAAAAAA AAAAAAAGAA 002160 002161 AAGAAAACAA AACAAAGGAA AAAGAAAACC CACTCTAGTC CTTGTGGCGA GGTAAATACT GCAGAATTGA CTCTGGCATC 002240 002241 CTGAAATGTG GTGTGGCATC GTAACAGGGG AACAAGAATA TGGGAGCAAT TTAAACCAAA CAAGACTCAA AAATGACAGC 002320 002321 AATCACGGAC CTGAACACGA CGCA |
Predicted Small Protein
Name | NONHSAT068691_smProtein_1823:2107 |
Length | 95 |
Molecular weight | 10063.7016 |
Aromaticity | 0.063829787234 |
Instability index | 62.0606382979 |
Isoelectric point | 10.450012207 |
Runs | 10 |
Runs residual | 0.0224329324699 |
Runs probability | 0.0362745098039 |
Amino acid sequence | MQSSVRTSLWAVPGTAGPTYLRCSGAPGPGGRLLGPHAPCLGRFGLNQGITSCILQLPSS CRARRSDMKLAPCVNHSRYSKQWLPLSLFLLSLP |
Secondary structure | LLLLEEEEEEEELLLLLLLEEEELLLLLLLLLLLLLLLLLLLLLLLLHHHHHHEELLLLL LLLLLLLLLLLLLLLLLLLLLLLLLLHHHHLLLL |
PRMN | - |
PiMo | - |