NONHSAT067993

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT067993

Source

NONCODE4.0

Same with

,

Classification

sense

Length

4141 nt

Genomic location

chr19-:55622744..55626884

Exon number

1

Exons

55622744..55626884

Genome context

Sequence
000001 GTTCTCAGTG GCCACCCTGC GCTACCCTCT CCCAGAACCT GAGCTGCTCT GACGCGGCCG TCTGGTGCGT TTCACTGATC 000080
000081 CTGGTGCTGC AGCTTCCTTA CACTTCCCAA GAGGAGAAgc agtttggaaa aacaaaatca gaataagttg gtcctgagtt 000160
000161 ctaactttgg ctcttcacct ttctagtccc caatttatat tgttcctccg tgcgtcagtt ttacctgtga gataaggcca 000240
000241 gtagccagcc ccgtcctggc agggctgtgg tgaggaGGGG GGTGTCCGTG TGGAAAACTC CCTTTGTGAG AATGGTGCGT 000320
000321 CCTAGGTGTT CACCAGGTCG TGGCCGCCTC TACTCCCTTT CTCTTTCTCC ATCCTTCTTT CCTTAAAGAG TCCCCAGTGC 000400
000401 TATCTGGGAC ATATTCCTCC GCCCAGAGCA GGGTCCCGCT TCCCTAAGGC CCTGCTCTGG GCTTCTGGGT TTGAGTCCTT 000480
000481 GGCAAGCCCA GGAGAGGCGC TCAGGCTTCC CTGTCCCCCT TCCTCGTCCA CCATCTCATG CCCCTGGCTC TCCTGCCCCT 000560
000561 TCCCTACAGG GGTTCCTGGC TCTGCTCTTC AGACTGAGCC CCGTTCCCCT GCATCCCCGT TCCCCTGCAT CCCCCTTCCC 000640
000641 CTGCATCCCC CAGAGGCCCC AGGCCACCTA CTTGGCCTGG ACCCCACGAG AGGCCACCCC AGCCCTGTCT ACCAGGCTGC 000720
000721 CTTTTGGGTG GATTCTCCTC CAACTGTGGG GTGACTGCTT GGCAAACTCA CTCTTCGGGG TATCCCAGGA GGCCTGGAGC 000800
000801 ATTGGGGTGG GCTGGGGTTC AGAGAGGAGG GATTCCCTTC TCAGGTTACG TGGCCAAGAA GCAGGGGAGC TGGGTTTGGG 000880
000881 TCAGGTCTGG GTGtggggtg accagcttat gctgtttgcc caggacagcc tagttttagc actgaaaccc tcagtcctag 000960
000961 gaaaacaggg atggttggtc acTGTCTCTG GGTGACTCTT GATTCCCGGC CAGTTTCTCC ACCTGGGGCT GTGTTTCTCG 001040
001041 TCCTGCATCC TTCTCCAGGC AGGTCCCCAA GCATCGCCCC CCTGCTGTGG CTGTTCCCAA GTTCTTAGGG TACCCCACGT 001120
001121 GGGTTTATCA ACCACTTGGT GAGGCTGGTA CCCTGCCCCC ATTCCTGCAC CCCAATTGCC TTAGTGGCTA GGGGGTTGgg 001200
001201 ggctagagta ggaggggctg gagccaggat tcttagggct gaacagagaa gagctggggg cctgggctcc tgggtttgag 001280
001281 agaggagggg ctggggcctg gactcctggg tccgagggag gaggggctgg ggcctggact cctgggtctg agggtggagg 001360
001361 gactgggggc ctggactcct gggtccgagg gaggaggggc tggggcctgg actcgtgggt ctgagggagg aggggctggg 001440
001441 ggcctggact tctgggtctt agggaggcgg ggctgggcct ggacccctgg gtctgaatgg ggagaggctg ggggcctgga 001520
001521 ctccttcatc tgagggcgga agggctgggg cctggcctcc tgggttgaat ggggaggggt tgggcctgga ctctggagtc 001600
001601 CCTGGTGCCC AGGCCTCAGG CATCTTTCAC AGGGATGCCT GTACTGGGCA GGTCCTTGAA AGGGAAAGGC CCATTGCTCT 001680
001681 CCTTGCCCCC CTCCCCTATC GCCATGACAA CTGGGTGGAA ATAAACGAGC CGAGTTCATC CCGTTCCCAG GGCACGTGCG 001760
001761 GCCCCTTCAC AGCCCGAGTT TCCATGACCT CATGCTCTTG GCCCTCGTAG CTCCCTCCCG CCTCCTCCAG ATGGGCAGCT 001840
001841 TTGGAGAGGT GAGGGACTTG GGGGGTAATT TATCCCGTGG ATCTAGGAGT TTAGCTTCAC TCCTTCCTCA GCTCCAGTTC 001920
001921 AGGTCCCGGA GCCCACCCAG TGTCCACAAG GCCTGGGGCA AGTCCCTCCT CCGACCCCCT GGACTTCGGC TTTTGTCCCC 002000
002001 CCAAGTTTTG GACCCCTAAG GGAAGAATGA GAAACGGTGG CCCGTGTCAG CCCCTGGCTG CAGGGCCCCG TGCAGAGGGG 002080
002081 GCCTCAGTGA ACTGGAGTGT GACAGCCTGG GGCCCAGGCA CACAGGTGTG CAGCTGTCTC ACCCCTCTGG GAGTCCCGCC 002160
002161 CAGGCCCCTG AGTCTGTCCC AGCACAGGGT GGCCTTCCTC CACCCTGCAT AGCCCTGGGC CCACGGCTTC GTTCCTGCAG 002240
002241 AGTATCTGCT GGGGTGGTTT CCGAGCTTGA CCCTTGGAAG GACCTGGctg ggtttaaggc aggaggggct gggggccagg 002320
002321 actcctggct ctgaaggagg aggggctggA ACCTCTTCCC TAGTCTGAGC ACTGGAAGCG CCACCTGTGG GTGGTGACGG 002400
002401 GGGTTTTGCC GTGTCTAACA GGTACCATGT GGGGTTCCCG CACCCAGATG AGAAGCCCCC TCCCTTCCCC GTTCACTTCC 002480
002481 TGTTTGCAGA TAGCCAGGAG TCCTTTCGTG GTTTCCACTG AGCACTGAAG GCCTGGCCGG CCTGACCACT GGGCAACCAG 002560
002561 GCGTATCTTA AACAGCCAGT GGCCAGAGGC TGTTGGGTCA TTTTCCCCAC TGTCCTAGCA CCGTGTCCCT GGATCTGTTT 002640
002641 TCGTGGCTCC CTCTGGAGTC CCGACTTGCT GGGACACCGT GGCTGGGGTA GGTGCGGCTG ACGGCTGTTT CCCACCCCCA 002720
002721 GGCCTGCATT GATGAGAACC TGGAGGTGGT GCGCTTCTTG GTGGAGCAGG GCGCCACTGT GAACCAGGCA GACAACGAGG 002800
002801 GCTGGACGCC ACTGCACGTG GCCGCCTCCT GTGGCTACCT AGATATCGCC AGGTGAGGCA AGGGAGGGCC GGGCAGGACC 002880
002881 TGGTCGGGGT GGGGGCCTGG ACCCTCAGCC CTGACCAGCC CCCACCCCCA GGTACCTCCT GAGCCACGGG GCCAACATCG 002960
002961 CCGCCGTCAA CAGTGACGGG GACCTGCCCC TGGACCTGGC CGAGTCGGAC GCCATGGAGG GGCTGCTGAA GGCGGAGATC 003040
003041 GCCCGCCGAG GTGGGCTCTG GTGTGCTGTG TGTGGGGTGG GGGACACCTC CTCACCCGTG GTCTCCAGGC TGAGAGCTTT 003120
003121 AGAGGCGGCC TGGGCACCGA GGCTGACCCT GCTTCCTAGG ATTGTCTTtc tttgtgcctc agtttcctca cctgtgaaat 003200
003201 gggggtgtag gggcctgcct ccaggattgc ttggagCCCA GCACACGCAC AGGATGAGAA CTCAAACCCC TACCAACTGG 003280
003281 GACTGTCAAT CCCCCTGAGT AACTGAGGGG ATTGGAATGC CGGGGCGGGG TGGGTGGGTG GAGGGACTCA CCCAGGAGTG 003360
003361 CGTTAGGTAG GATTGCTGGA ACCCTGCCGC AGGTCTTTCT GGGAGGGGAT GCGTTTACTT GGGGGGGAGT AGGGGCATGC 003440
003441 AGGGGTTGCC AGGGACTGGT CTCCCTGTCC TCTGAGACTC ATCGTACCCC AGGAGCCTTC ATATGGGGTC CAGGAGCCCC 003520
003521 TGAAACTGTG TCTGGCCAGG TTCATTTTTC TAGGGAAGGG GTGTTGCTTC TAGCAGGTGT GTGATGGCCA CACAGGATCC 003600
003601 CTGGGTCCCC AGCATGTCTT CTAAagtcct gggcttgcct cccagctctg cctgtgactg gtgactccag gcacgtccct 003680
003681 gaagcttgct tccctgattt cctaaaacag gaccactggt gccgcttcat ggggtggttg tcagggtctg gctgggttgg 003760
003761 agtggaaggg tgtgagcatg gttcccggca gacTCCAGGG GACCGTGTGG AAGGAAAGGG AGACTGACGA GGAAATGAGA 003840
003841 TACCGGCAGC CTCCGAGACT TCTGACGCGG CTGTCCTGAC GGGGCCGCTG GCCAGGCTGA AAGGATAGGA TTCCGCGTGG 003920
003921 GTTCAGGGGT CCACGAGAGC CATGCGGGAG GACTAGCTAG TGGGACACGT GACGGCGGAG ATCTGAGGTT CGGGAGCCCC 004000
004001 TCTTTGGTTG AAATGGGGAG TGGGTCAAAT CAGCCCTGGA CCTGGATTCT GTCTCCTTCC TCCTCCAACt ttttattttg 004080
004081 ggaaagcttc agatttacag aaaagttgaa gcaatagcat gtgactaccc atatgacttt c
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Predicted Small Protein

Name NONHSAT067993_smProtein_1568:1723
Length 52
Molecular weight 5463.4481
Aromaticity 0.078431372549
Instability index 51.1117647059
Isoelectric point 11.7339477539
Runs 7
Runs residual 0.0169869928169
Runs probability 0.0408685996921
Amino acid sequence MGRGWAWTLESLVPRPQASFTGMPVLGRSLKGKGPLLSLPPSPIAMTTGWK
Secondary structure LLLLHHHHHHHLLLLLLLLLLLLLLLLEELLLLLLEELLLLLLLLLLLLLL
PRMN -
PiMo -