NONHSAT067422

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT067422

Source

NONCODE4.0

Same with

,

Classification

sense

Length

4728 nt

Genomic location

chr19+:51729222..51747115

Exon number

6

Exons

51729222..51729337,51738412..51738508,51738850..51738931,51739078..51742993,51746298..51746363,51746665..51747115

Genome context

Sequence
000001 CTCGGTGCTC ATAATCACCC CACGGCCCCA GGACCACGGC ACCAACCTGA CCTGTCAGGT GAAGTTCGCT GGAGCTGGTG 000080
000081 TGACTACGGA GAGAACCATC CAGCTCAACG TCACCTGGAA ACAAGAGACC AGAGCAGGAG TGGTTCATGG GGCCATTGGA 000160
000161 GGAGCTGGTG TTACAGCCCT GCTCGCTCTT TGTCTCTGCC TCATCTTCTT CATAGTGAAG ACCCACAGGA GGAAAGCAGC 000240
000241 CAGGACAGCA GTGGGCAGGA ATGACACCCA CCCTACCACA GGGTCAGCCT CCCCGgtacg ttgaggccaa cagatcagga 000320
000321 gatgatggcc attgaaaaga tagtttcttg gccgggcaca gtgtttcaca cctgcaatcc cagcaccttt ggaggccaag 000400
000401 gcgggcggat cacgaggtca ggagattgag actatcctgg ctaacatggt gaaaccccgt ctctactaaa aatacaaaaa 000480
000481 attagccaga tgtggtggct ggcgcctgta gtcccagcta cttgggaggc tgaggcagga gaatggtatg aacccgggag 000560
000561 gcagagcttg tagtgagccg acatagcacc actgcactcc agcctgggtg acagagagag actctgtccc aaaaagaaaa 000640
000641 aaaaaatagt ttcttattca ccgttcccga gagggcacac cacaccatgc aaggccatat ggagaagcac cagggtcagt 000720
000721 caggaagcag agggagcaag gagaaaatgg gacaagagcc ttcactgtgg ctttcatgga aaagaatggg caagacaggg 000800
000801 taagcaagct aggcaggttt aggattggct acttagaaca atttcagcag actctggggt ataggagttg tctctagttg 000880
000881 tctggtacat ggccctgggt ttattaagga ggattgtggt ctggagtgta agagctcaat aaaggatcca gctggtagtg 000960
000961 tgggctttag attgactggt ttgcacatga aaggtgcact tgtatgcaag tcctttatta gctctagaaa tctactatcc 001040
001041 ttgggaaagg cagtctctca agggtcagta atgccccaga tgtcaaaaca tcagaaacac TTGGTTGACA CACCCCTAAA 001120
001121 CATACTTCTC CTGATGGGTT CTCCATCTCG CTGATGGCAC TCTTGTCCCC ATTACCCAAC CAGAGACATG GCCCCCTCCT 001200
001201 GTCCCAGTCC TCCATCTCTT CCTGTGCCAG TATGCTACGA TGCATGTCTG AGCTTCCTCT GAACACGGCT TAACACAACC 001280
001281 ACTCCTGAGC CGAGAGCCCC TCTTACTCCT TATTCTGCTG CAGCCTCACC TCCCATTTCT CCTCTCCAGA ACATTAGCAT 001360
001361 CACCTCCCTA AAAGGTCATT GTCCCATCAT TCCCAAGTTT GAAATGCACT GCTTCTCTAC ACTCCTGAAA GATTGGCATT 001440
001441 CCAACAACTT GGTCTGGCAT TTGGAGCAGG AAAACCAGAG TCCCCTTCAG TGCTATGCTC CCCCAACATT AGCCACTCAA 001520
001521 TCACCTCAAG CAGGGCAAGC TTTCTCATCT CAGAATCATT GCTGGGCTGT CCCCTCCTCC TCATATGCCT AATAGCTACC 001600
001601 TGCCCAACTC CAGTGCATCC TTCAAGCTCT Gatttttttt ttaatttatt taaCTCTGAC TAAAGTGAAC ACCACAGTAA 001680
001681 AGTTTTTGAA CACAGGGTCA ACCAGCACCC ATTCATTCTG AAATATCTAT ATAATCCCAT TTGCCAATTG CTCTAGGTCC 001760
001761 TTGTGCCATT CTGTATTTTT ATAAACACAC AGTTTACAAA Tataaaatat tcctcctatc gggggcttaa catttattgg 001840
001841 ggaaagggat gaaaataatg aacaaataag cagtgcaaat atacatgaaa taggcatgaa ataagtgcta tggcaggaaa 001920
001921 tgaaatggga gaacggattg gacagtcctg ggggccaaag aatggccttt gggcaaacac ctgcagaaag aaagtgagta 002000
002001 cagtatgagc agtagagaat catcaaggaa gcagcaagta ccatggctct gaggccggaa cacatctgat gttttagaga 002080
002081 aacaaagtag gacagtgtgg ataaggcaga gttacgtgtt gggggtggag tgtggactga acaatggtag gtaggaaatg 002160
002161 aggttgaaga gacataggag ctgcaaatat tgcaggatcc taagtccatc atagttattg atgcgtttag agcagaagag 002240
002241 tgacatgaac tgacactcat tttagtggga gtcactctgg ctgctctgtg agaaactcta gtatgtagta tagaagagaa 002320
002321 gataccagaa tagaagatac acagataatc aagccaagag atgactgact cagacttagt cccaagtaag aataatgaat 002400
002401 ctgatgtgga gaaattgggt tccggataca tcttgaaggt ggagtcaaca gtatttgcaa gtggagtgat ggagtgcatg 002480
002481 caaggcatga gcaaagatag ctcacgggct ctgctcgata agtgtctcag atgtcatagg tgggtccaca gatatcatag 002560
002561 atgtcatgga tgtccaagaa gaccccatag atgtcataga tgtctataga tgccaatgat gatgttcatg tggttaactc 002640
002641 agaattcaaa cttaaaaaat caaattgcca atgattaaaa ttgccatcct tgaaggagaa gtctattttc aagtgtatat 002720
002721 caaacattat tttggttacc gtaagtttga ggtgcctctg agacatccat gtggagatga caagtagcag gcaagtgtct 002800
002801 ggagctcaga agagggctcc acgtgggaga cacagaggtt gggagcttcc ctatcaacat ccaataatcg atgaatctac 002880
002881 aaagaagaga aggggtccac agacacagcc ctggaaccct ccagcattta atgttaggga gatgaggtgt aaatggtgag 002960
002961 aaagctgaga atgaatagga gccaatgacc aggaaattgc aggctgtagt gttggtggcc aagggaagat ggggcttcat 003040
003041 ggaggagagg ttggtcattt gtttcaaatg ctggtaagtc tggtaagatg gaatctgaga aatggctatt tgaatgtagc 003120
003121 taagtggtat gacagcaaag cagatctgat ttttctgctg gaggaagatc tcttgactag agagagttca agagagaatg 003200
003201 ggaggagaag aggcagaaac tgtgagttga aggactcttt tgagaaacac tgccccaaat ctagaaccaa gaaatgggCC 003280
003281 TGCACCAGCA AATGGTTGTA CCCTGTAGAC TTGCCATTTC TCCAGCATCT GCTCCTGTGT CTCTTATGAT ACCATGTTCC 003360
003361 CTGTTTGTGT AGGGCTTTGC ACCACTTGAA CTAACTGCAT TCCCATAGCT TCCCCTACCA CACCATGAGC TCCACAAGGA 003440
003441 AAAGCCTGGG TTTTATTAGA CCTCCATCAT TCTACTCTCT CCTGTTCATC TGCACACTGT CACAATTTGC AATTACCAGT 003520
003521 CTGTTTCTGT CTTCATCCCC TGCAGTACTG GAAATCACAG GGCCCCTGCT CTGCTCTGCT CCCTCCTGAG GATCCAGTGC 003600
003601 CCAGCACATA GGAGGTCCCA Gagacctggg accgagttca gggtcaacag atgtgtgact ttggaaatta cctaagctct 003680
003681 ctgagaccta gtttcctggt ctgtaaaatg gattaaaata atagatgccA AAGATGATGT CAGTGTAGCT GCCCAGAATT 003760
003761 TTTCCACATT AGTCTCTGTG AGTATTCAAG AGAATTGCGA ATCAATCAAT ACGTGCTACA TGTGTTAGAT AATGAATAAG 003840
003841 TAGAGCCTTA ATTAATTAAC ATTTGATGAA AGAATGAAAG AGTGAATAAA TGTTCTGTCA GAGTCAAATT TACTTCATTG 003920
003921 ACCCTCTTTG CCTTCTCCTG GTCCCCCTCC TCACTGCCCT GCTCTAACCC CCTTCTTTCC TCTCCATAAG AAACACCAGA 004000
004001 AGAAGTCCAA GTTACATGGC CCCACTGAAA CCTCAAGCTG TTCAGGTGCC GCCCCTACTG TGGAGATGGA TGAGGAGCTG 004080
004081 CATTATGCTT CCCTCAACTT TCATGGGATG AATCCTTCCA AGGACACCTC CACCGAATAC TCAGAGGTCA GGACCCAGTG 004160
004161 AGGAACCCAC AAGAGCATCA GGCTCAGCTA GAAGATCCAC ATCCTCTACA GATCCCAATT TAGGTTCCTC TGCCTGTTCC 004240
004241 TCTAAGAGGC CACTGTTTGA ACCACTTCCT GAATCTGtag ccaaaaattg gaagcaaccc aaatgtccat caactaatga 004320
004321 aggaataaac aaaatctggt acattcctgc aatgcatatc attcagacat aaagatgggc cgaagtacag atacatgcta 004400
004401 caacgtgtat gaacttcgaa agcatcacac caagtgaaag aagccagaca ctaaagatca cgtaccatat gattccattg 004480
004481 atatgaaatg tctagaatag gaaatacatt tctggaggca gaaagcaggt cggcggttgc caggggcttc gaggagggca 004560
004561 gtgactgctt agtgagtaca tgctttcctt ttggggcaat gaaaatgttt agaaccaaac agaggttgtg gttacacaac 004640
004641 gttgtgtatg tactgaatgc caccgagttg ttcactttaa catgttcatt gtatgtaacg tgattttaca tcaataaaaa 004720
004721 aaaATAAT
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Predicted Small Protein

Name NONHSAT067422_smProtein_2360:2608
Length 83
Molecular weight 9446.8339
Aromaticity 0.0487804878049
Instability index 74.2695121951
Isoelectric point 8.97601318359
Runs 8
Runs residual 0.0383407243163
Runs probability 0.0405405405405
Amino acid sequence MTDSDLVPSKNNESDVEKLGSGYILKVESTVFASGVMECMQGMSKDSSRALLDKCLRCHR
WVHRYHRCHGCPRRPHRCHRCL
Secondary structure LLLLLLLLLLLLHHHHHHLLLLEEEEEEEEEEEEEHHHHHHLLLLLLHHHHHHHHHHHHH
HHHHHHLLLLLLLLLLLLLLLL
PRMN -
PiMo -