NONHSAT067415
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT067415 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
overlapping(AS) |
Length |
1094 nt |
Genomic location |
chr19-:51666261..51774419 |
Exon number |
6 |
Exons |
51666261..51666877,51668102..51668170,51668478..51668530,51697791..51697916,51773417..51773498,51774273..51774419 |
Genome context |
|
Sequence |
000001 AGCCTGAGCT AGTCAGAAGC AACAGTTGCT ACTGCGTCCC CCGGACATTG GGAGAATCGT TTTCCTTGGG CAGCTGGTTC 000080
000081 CAGACCCCCA CCAGTCCTCT AGACTCCAGG CCAATCAGTT GCTAAGGGAC GTTCCTCTCT CAACCTGcac ttatcaacat 000160 000161 tttaagctat aaattcgtct gcatttcttc atcgtctgtc tatgtagacc atgactccac ggaggcaggt gaagtcaaga 000240 000241 acctgaactg gcccaccagc tacaAAGCCA GAGCGTGCCC ACCACTTCTG TACTTGCAAA AGATGTGTTT GCAAAACGGG 000320 000321 TCACCAGAGC CTGTGGGTGA GCAGTTGTGC AGGAGctcac cattcccatc gcgtatgctg ggaaatcatc aatatacccg 000400 000401 ctgtcatgga attgcagaat cgttatccaa atggctttga cttttaccac tactcccagc catgcaccag aattccgATC 000480 000481 CATTTCTCTG TTCCTTTTTG TGTTTCTGCA ACATGACCTC AGTTCTCTCA GGAAGCCCCA AAACCTGTGA AACTAACCTG 000560 000561 TGCTTGCAGC TCTGCTTGCT GCCAGAAACA AAGGCTGGGA GCCAGCAACA GGAACCAGCC AGGGGATGAG TTCAGCCCAG 000640 000641 ACGTGCTGCC TGGACCTGGA TTCCTGCCTC AGTGCAGGCC TTGACCTGAT TTcttgcttc attaccatac taaaatctcc 000720 000721 actcaggggc gagaactatg ccttGCTAGG CACAGAAGGT GCCAAGTACA AAAGAAAACA CAAGAGTGTG CACACTTCAG 000800 000801 CCCCTCCTGA AGGAACCCAC CTTTTTCCAG ATCTGCCCGC CTCAGTCTCC AACTACCTGC CCTAAGGGCc cttaagatcc 000880 000881 ccttttacca acccctggga gaaggtgctt tgcacatgaa ctccctttct ccatttcttg atcaatgaat aaaGTTTCTT 000960 000961 CTCCGCTTTG CCGATTCTGG TCTCATTCTA TTGGCGTAAG TGGCAGGGGG CAGAGAAAGG ACCCACTAGG GCCAACTCAC 001040 001041 CCCTCCAAGG GTGGGTAACA tttgcagcaa aactcctcaa gaggttgttt gtcg |
Predicted Small Protein
Name | NONHSAT067415_smProtein_461:628 |
Length | 56 |
Molecular weight | 6008.8806 |
Aromaticity | 0.0545454545455 |
Instability index | 67.5272727273 |
Isoelectric point | 5.50848388672 |
Runs | 10 |
Runs residual | 0.030303030303 |
Runs probability | 0.0445239357003 |
Amino acid sequence | MHQNSDPFLCSFLCFCNMTSVLSGSPKTCETNLCLQLCLLPETKAGSQQQEPARG |
Secondary structure | LLLLLLHHHHHHHHHLLLLEELLLLLLLHHHLHHHEEEELLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |