NONHSAT066911
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT066911 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
990 nt |
Genomic location |
chr19-:47181786..47189437 |
Exon number |
3 |
Exons |
47181786..47181920,47184907..47185005,47188682..47189437 |
Genome context |
|
Sequence |
000001 TGGTTTCTGT GTTTCACATC CTTCCTAGAA AGGCTTCCTT CTGGTGGGTG CCTTGCCTTC TTCTGAGACA TCTCTGTGGG 000080
000081 TCTCAGAGCC ATCGTTGCTG TGTTCCCTTT ACCCTGGCCC AGCACCCTTA TCCTCTCAGG CAGTGTGCCT GTGTTTGTCA 000160 000161 GGCTGGCTTA TGGGGTGGGG ACAGAAACCC ACTGATGCAC CCTCATCCAG ACtttattat ttatgtattt ttgagacaga 000240 000241 gtctcgcttt gttgcccagg ctggagcgca gtgacacgat ctcggctcac tgcaccctct gccccctggg ttcaggtgat 000320 000321 tctcctacct cagcctcccg agtagctggg attataggtg tgtgccacca tgcctggcta atttttgtaa ttttagtaga 000400 000401 gatggggttt catcatgttg cccaggccag tctcaaactc ctgacctcaa gtcatctgcc tgcctcagcc tcctgaagtg 000480 000481 ctgggattac aggcatgagc catcgtgccc ggccACATCC AGACTTCAGG TGTGGAAAGG AATCATGGTT CTCACAGGTG 000560 000561 GCTGCTTTCA GCAGCTGAGG GGGTTTCTCT TTCTGGCCTT CAtctcttcc tctctttttg cctgctcgct cttctttctc 000640 000641 tctctctctc tctctGCAGA TTTCTGCTTT CTGGGCTCTT GCCTGCCCCA CACctaagcc ctgtgctaag ccctttacct 000720 000721 cctgagctta tgtaggcctc accaccatcc taggagATCC TGGTGGCTTT GAGACACCTT CACTTCAAGA ACATTGTCCA 000800 000801 CTGTGACTTG AAACCAGAAA ACGTGTTGCT GGCATCAGCA GACCCATTTC CTCAGGTGAA GCTGTGTGAC TTTGGCTTTG 000880 000881 CTCGCATCAT CGGCGAGAAG TCGTTCCGCC GCTCAGTGGT GGGCACGCCG GCCTACCTGG CACCCGAGGT GCTGCTCAAC 000960 000961 CAGGGCTACA ACCGCTCGCT GGACATGTGG |
Predicted Small Protein
Name | NONHSAT066911_smProtein_194:475 |
Length | 94 |
Molecular weight | 10052.6224 |
Aromaticity | 0.0645161290323 |
Instability index | 50.9537634409 |
Isoelectric point | 7.08648681641 |
Runs | 12 |
Runs residual | 0.00189167662286 |
Runs probability | 0.0655508449626 |
Amino acid sequence | MHPHPDFIIYVFLRQSLALLPRLERSDTISAHCTLCPLGSGDSPTSASRVAGIIGVCHHA WLIFVILVEMGFHHVAQASLKLLTSSHLPASAS |
Secondary structure | LLLLLLEEEEEHHHHHHHHLLLLLLLLLEEEELEELLLLLLLLLLLHHHHHHHHHHHHHH HHHHHHHHHHLHHHHHHHHHHHHHLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHH HHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTT TTTTTTTTTTTTToooooooooooooooooooo |