NONHSAT066869

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT066869

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1871 nt

Genomic location

chr19+:46713305..46718362

Exon number

4

Exons

46713305..46713526,46715373..46715491,46716047..46716267,46717054..46718362

Genome context

Sequence
000001 GTTCAGCTAA AAATAAAGCC CTTTATCAGT TTGGTCACTG GAAGGACTTG TTCCCTTCTT GTTGATGATC AGAAACCTTA 000080
000081 GCAGGAACTA ATTCTCAAGT GTCTGCCTTA ACAGAAAAGC CACAAAGAAA CATGGTAAGA GCGTGGCAGA TAACATCCAC 000160
000161 GGTGCTATCG GGAGGTGACA ggtgactgac ctcagccttg gtgttcaaga agattccaga agCACGTCCT AATCTGTGTC 000240
000241 CTGGAAAACA ACACTCTACC CCACAGCAAC AAGGCATGGA GGCCAATGGA GAAGACAGGG AGATGGTGCT GGAAGCAGGG 000320
000321 TCTGCTCTTC CCCTGGGGAA Gcactgcatc accagtgtct gacacaaagc ctgggacatg tgggcttcca agtggacctc 000400
000401 tcctggataa atgaCCATTA ATGAAACAGA GAAGGAGTTG AAGAGCCCCC AGAGGAGTGT GAGTCCCAGG GGTCCCGCCA 000480
000481 GCTCCACTCC CACCTTCCAA ACCTGTGAAA GTCAGGTGCC TGAGTCGCAC AGTCTCTCCC ACCCGAATGC CATGAGCTGC 000560
000561 AGCTGTCTTG GCCGCTTTCT GTTTGTGACT CTCCCTGCCT CCACTCCCCC CACCACCCCA TGAAATGATC TCATTTGGTC 000640
000641 ATTTAAACGG AAAACTAAAA AGTTTTAAGT GACTCTAGGA GAGCAGGAGA GAGGCAGGTC TCCCAGCTCA GACCCCGCCC 000720
000721 CGGGACGGCC CCACGGAAGA TGCACATCTG GATGTAGGCG CTCAAGGCAC CGCGCGTGCG CCGAGTGGCC TTGCTCAGCT 000800
000801 CCGTCCTTCT GAAACCCGGA ATCCTCATGT GTCTGGGTCC CGCCCCATCC TGGCCTCCTA CACCACTGGT CCAGATCCTC 000880
000881 CACCTTCCCC CAACGCGAGG TATTGACATC AAAGCATCAC CTCATCTGGC ACAAGAATCT GAAACACAGA CCGCACCTTA 000960
000961 CACCAACGTA GTGAATCCCT CCTTGGACCT GAGTTCAACA AGCCCAGAGT CGGGGCTCTG GGTTCCCGCC CAAATGCCAC 001040
001041 GCATGCACAC AGATGGCACC TGGCGTCTCC TCAAAGGGAC AGGAATCCCG GGCTTCCCAG AATCACCAGG TCGATTTAAA 001120
001121 TGGCATCAGA TGAACTGGAA AAGAATGAAA GTGCTATTGC CTAAAGTGAT GAAATTTTCA GAGGATGTAT CGGTCCTGTC 001200
001201 TGGTGGACAG ACGGCCACCA GAGGGAATGA ACCAGTCTTC TCTGAACATC CATGAGGATG AAGAACAGTC ACTGAGGTGA 001280
001281 CGgtaccaag tcaccggcca cctcccaggg atcctctcat ccggtcctca cagcagcgct gcatggtcgg acctcatcac 001360
001361 ccacattcca ccaagaggaa gctgaagccc agggCCTTCA TCCACTCATG TCCTCCAGAC CCCTGGCACC CATCCTGGGC 001440
001441 CCCACCCCAT CATCCAGGCC TTGGGCCTTC GACCTGGGGA GAGTCCCTGT CTCCTCCATG AGCCGTCCAG GGCCTGAAGA 001520
001521 GGTATCCAAT AAACAAGAAA GCAGAACACA AAGAGCTGTG ATGGAGTGGA TCTTATGTAG TAAGAATAAA ATTATTTTGA 001600
001601 GAAATTACTG GGTCATGTAT TTACCCACAG AAAAACAGAA GCAAacacac gcgtgcgcgc acacacacac acacacacca 001680
001681 cacaGGCTGT CACGTGTCCT CAGCACAAAG TGCCTTGAGA AAGGCCATTG CTGGCCCCAC ACTTATCCTG ACTGTGATCT 001760
001761 TGCTGTGATC AGCACATCCC ATCAGTGTGG CAACAGGTGT GGCCAGAGTG GGAACCAGGC CTTTTCTTCA GATTTGCTCT 001840
001841 TTGTTCCTGA ATAGCCACCG TCAGAACAGA C
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Predicted Small Protein

Name NONHSAT066869_smProtein_410:622
Length 71
Molecular weight 7518.3901
Aromaticity 0.0428571428571
Instability index 74.9271428571
Isoelectric point 6.69915771484
Runs 9
Runs residual 0.0162659123055
Runs probability 0.0443678973092
Amino acid sequence MTINETEKELKSPQRSVSPRGPASSTPTFQTCESQVPESHSLSHPNAMSCSCLGRFLFVT
LPASTPPTTP
Secondary structure LLLLLLHHHLLLLLLLLLLLLLLLLLLLLEEEELLLLLLLLLLLLLLLEELLLLLEEEEE
LLLLLLLLLL
PRMN -
PiMo -