NONHSAT064302
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT064302 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1707 nt |
Genomic location |
chr19-:35033367..35036300 |
Exon number |
3 |
Exons |
35033367..35034844,35035819..35035917,35036171..35036300 |
Genome context |
|
Sequence |
000001 CTATTTCAGG TGACATTTAG TGATGTGGCT ATAGACTTCT CTCATGAAGA GTGGGCATGC CTAGATTCTG CTCAGAGGGA 000080
000081 CTTATACAAG GATGTGATGG TCCAGAATTA TGAGAACCTT GTCTCTGTAG CAGGTCTTTC CATAACTAAG CCATATGTGA 000160 000161 TCACATTGTT GGAGCATGGG AAAGAGCCCT GGATGGTGGA GAAAAAACTG TCAAAAGGTA TGATTCCAGG TTGGGAATCA 000240 000241 AGATGGGAAA ACAAGGAATT ATCAACAAAG AAGGATATTT ATAAGGAAGA TTCACTCCAA ACAGTAACAA TAGAAAAAGT 000320 000321 TTTAAAACAA AGTTATGAAT TTTCAAATTC TACCAAGAAT TTGGAACACA TAGAAAAGTT GGAAGGGAAG CCTGGAATTC 000400 000401 ATGTAGAACA TTTCAGACCA GCAACTCTCA CCTCTAGAGA AAGCCCCACT GGGGACAGTT ACAAATATGA CACATTTAGA 000480 000481 ATCACCTTTC ATTCAAAGTC TACTCTTTCT GAACCATAAA AAAATTCTGC TAAAGGGAAT TCACACAAAT ACAATATATT 000560 000561 AAAGAAGAAT TTACCAAAAA AGTCAGTTGT AAAAAATGAG AGACTCAATG GTGGAAAGAA ACTCTTGAAT TCTAATAAAA 000640 000641 GTGGAGCAGC CGTTAACCAG AGCACCTCTC CTCACCACAC TTATAATAGA GAAAGTCTAT ACATCTAGGG AATGTGGGAA 000720 000721 AGCCTTTGGC AAACAGTCAA TCCTCAATCG CCACTGGAGA ATTCATACAG GAGAGAAGCC CTGTGAATGT CGTGAATGTG 000800 000801 GGAAGACTTT TAGCCACGGC TCATCCCTTA CACGACATCA GATAAGCCAT AGTGGAGAGA AACCTTACAA ATGTATTGAA 000880 000881 TGTGGGAAGG CCTTTAGCCA TGGCTCATCA CTTACTAACC ATCAGAGCAC TCACACTGGA GAGAAACCAT ATGAATGTAT 000960 000961 GAACTGTGGA AAGTCTTTTA GGCGTGTGTC CCATCTTATT GAACATCTAA GAATTCATAC GCAAGAAAAA CTCTATGAGT 001040 001041 GTCGTATATG TGGAAAGGCC TTCATTCATA CGTCGTCTCT CATTCACCAT CAGAAAATCC ATACTGGAGA GAAGCCTTAT 001120 001121 GAATGTAGAG AATGTGAGAA AGCTTTCTGC TGTAGCTCAC ACCTTACTCC ACATCAAAGA ATTCACACTA TGGAGAAACA 001200 001201 ATATGAATGC AACAAATGTC TGAAAGTCTT TAGTAGCCTC TCATTTCTTG TTCAGCATCA GAGTATTCAT ACTGAAGAAA 001280 001281 AACCCTTTGA ATGTCAGAAA TGCAGGAAAT CCTTCAACCA GCTTGAATCA CTGAATATGC ATTTGAGAAA TCACATTAGA 001360 001361 TTGAAATGTG ATTTCTATCT AATGAATGCC ATATATGTGG GAAAGCCTTT AGTCATAGGT CATCCCTGCT TCAACATCAC 001440 001441 AGAATTCATA CTGGAGAGAA ACCTTACGAA TGTATTAAAT GTGGGAAGAC CTTCAGCTGT AGTTCAAACC TTACCGTACA 001520 001521 TCAGAGAATT CATACTGGAG AAAAGCCATA TAAATGTAGT GAGTGTGGGA AAGCTTTTAG CAAAGGCTCA AATCTTACTG 001600 001601 CCCATCAAAG AGTACATAAT GGAGAGAAAC CCAATAGTGT GGTAAGTGTG GAAAAGCCTT TAGACTATAT GAATCACTAT 001680 001681 ACATGTGAGA AATCTTACAG AAGAGAA |
Predicted Small Protein
Name | NONHSAT064302_smProtein_1034:1222 |
Length | 63 |
Molecular weight | 7331.5537 |
Aromaticity | 0.0806451612903 |
Instability index | 46.5032258065 |
Isoelectric point | 11.3099975586 |
Runs | 10 |
Runs residual | 0.00764976958525 |
Runs probability | 0.0260024730613 |
Amino acid sequence | MSVVYVERPSFIRRLSFTIRKSILERSLMNVENVRKLSAVAHTLLHIKEFTLWRNNMNAT NV |
Secondary structure | LEEEEEELLLLEEHHHHHHHHHHHHHHHHLHHHHHHHHHHHHHHHHHHHHHLHHHLLLLL LL |
PRMN | - |
PiMo | - |