NONHSAT063906

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT063906

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3069 nt

Genomic location

chr19-:23581791..23598903

Exon number

7

Exons

23581791..23583851,23584979..23585314,23586481..23586549,23587704..23587910,23588060..23588139,23588802..23588909,23598696..23598903

Genome context

Sequence
000001 TTGGAGAGGA GGGCGTGGCA TCCGGCATTT GGCGGGGCTT TTGTCTCTCG CTGCAGCCAG AGCTTGGGAT CGCTTTCTGC 000080
000081 TATTCAACGT CCTCCACCTC TGCCCCCCTC TCGCCCCAGC CGGTGACAGG CTGTTGCCCT GTGATCTGCA GGTCCTGGGA 000160
000161 CGTGCACAGA CAGCTAAGAT GCCAGGACAT TCCAGAAGGT GGGAAAGGAG GAGGAGACTG TAACGTATCC CTAATTGAGC 000240
000241 ACCCAGGTGG TGTGACACTT CTGCCCTGTC CCTGCCCTCA GAGGAGATTC TGACATATCA CTGCCCCAAA ATGCAGAGCA 000320
000321 CCTGAGTAAT TTGACTCTCC TGCCTGGACC CAGCGTACAG ATGGGATTGT GCTTCATTGC TGGACCCAGC ATTTAGGCCC 000400
000401 ACTACCTATG AGATTGCATG CTCCTGCCTG GGCTGTGCCC ACAGTGACCT TGTGACATAT ATCTGCATCC ATGACCTAAA 000480
000481 AGATGTGACA CTTCTTGCCT GCAACCTGCC CTGCACAGGA AAGATTGCGA CTTCTCCCTG GAAGCAGACA CCAGGTGATG 000560
000561 TGGCTCTCCT GCCTCTGTCT TGCCCCCAGG GAGCATTGTG ACAGGATCGT CACTCCCGTG GATGATCAAA GGTCAGTTCC 000640
000641 TGGTCAATAT AAGTAAACAA GCCTGTTTAA GAGTTCTGCT AGCAAGGAAG ACTGAGACAT ATTGTGGGGC TCTACGCCAA 000720
000721 TGTGACATTA CTGTTCTGCC TTGGCCTGTA CCTGAAAAGG CATTGTGACA TATTGCTGGG CCCAGCAACA AGGTGGCATG 000800
000801 AGTCTTCCGT ATGGACCCTG ACAACAGAGC ATTGTGACAT ATCTTTAAGA GCATCAACTA TTTGATGTGA CTCTCCTTTT 000880
000881 CTACCAAGGC TTTCCTCATA TGAGAGATTG TGACACATCT TCTGGCACAG AAATCAAGTG ATGTGTTTCT CCTGCCTGAG 000960
000961 CTTTGCTCAT AGAAAGCATT GTGACATATC TCTGGTCTCA GCACCCAGAG GTGTGATTTT GACGCACACT TCTGCCCAGC 001040
001041 ACCTGAGTAA TGTGATTCTT CAGAATTGGC CCGGCCCACA AATAGGATTG TGCCACACTG CTGGACCCAG TGCCTAAGTG 001120
001121 ATGTAACTCT ATTCTTCTGC CTTGGTGCTA CTCGAAAAAG ACATTGTAAC ATATCTCAGA GCCTTACACC CAGGTAATGT 001200
001201 GAGTCTCCTC TTCTGCCTTG CTGCTGCACA CAGAAGCGGA ATATGTACAG GATTGTTAAT CTCATCTTGG ATCTTCCTGC 001280
001281 ACTTGTGATT GTGACACATG CCTCTGTGTA GAACCTGAGT GAGTTTACTC TCCTGCCTGG ATTTAACCCA TAGATGGAAT 001360
001361 CGTGACATAT CACTGTACCA GAAACTAGGT GATGTGACTC TATTTTCTTG CCTCTGTGTT TTTATATGGG GCATCGTGAC 001440
001441 ATATCACTGG GCCTTGCACC CAAGTGATGG GAGTTTTCTC TCCTGCTTTG GTGCCGTCCA CAATGAAAAT TGTGAAATAT 001520
001521 TGCTGCCCTC CCCACTAGGT TATGTTACTC TCCTGCCTCT GCTTTGCCCA CATGGGTCAC TGTGACATAT TGCTGGGTCT 001600
001601 AAAACCCAGG TAATGTCACT CTCTTGTTTG GGTTCTGCCT GCAGGAGTCA TTGTCACATA TCTCTATGCT CATCACCCAG 001680
001681 GTAATATGAT TCCCTTTTAC TGCTTAGTTC CTTCTCACAA AACAACTTGT GACATATTGC TAGGCCCAAT ACACCTAGCT 001760
001761 GGTGTAACTC TTCTTTTCTT TTCTTTCCTT TTTTTTTTTT TTTTTTTGAG ATGGAGTCTC ACTCTGTTGC CCAGGCTGGA 001840
001841 GTGCAGCGGC ATGATTTCAG CTCACTACAG CCTCTGCCTC CTAGGTTGAA GCGATTGTCC TGACTTGGCC TCCCAAGTAG 001920
001921 CTGGGATTAA AGGCATGTGC CACCACGCCC GGCTAATTTT TGTATTTATA GTAGAGACAG GGTTTCGCCA TGTTGGCTAG 002000
002001 GCTGGTTTCG AACTTCTAAC CTCAGGTGAT CCTCCTGCCT CGGCCTCCCA AAGTACTGGA ATTACAGGCA TGAGCCACTG 002080
002081 CACCTGGCCT GATTCTTCTC TTCTTTCTAG GTTTCAACTG CAGCAGAGAT TGTAACAAAC CACTGGGCCC AGCCGCATAA 002160
002161 TGATGTTACT CTTTTGCCTT GGGCCTGCCC TCAGAAGGCA CTGTCACATA TTCATGGGCC CAACGCCAAG GTGATATGTG 002240
002241 TCTCCAGCCT GGACCCTGCC CACAGGGGGC ATTGTGACAT ATCTCTTGGC CCATCAGATG TTTGATTGTT ATCCCCTCCC 002320
002321 CTCTTCTACC CTGTGTTTGC CTATAAAAGA CACAGTCATA TGTTCCTGGG CCCAGCACCT AGGTGTTGTC TTACTGGAAT 002400
002401 GTGTCCACAT GGGGATTGTG ATATGTCACG TGGCCCAGTA CTTAACTTGA TGTGACTCTC CTCTCATGCC TAGGCCTTGT 002480
002481 AGAGAATCCC CTTCCCCTTT TGTTTTCCTT TTTTTCTTTG CAGATCCAGG AGATAATCAA CTAAGAGCCA GGCACCCGTT 002560
002561 TAGGTCTAAT AAACATTTTA CAAACTGCTC TCTCTTTTAA TTCACCTATC TGAGAGATTC CTCTGTACAA TAAAACTTGG 002640
002641 TCTCCACAAT CCTTTACCTT AACCTAAACC TTCCCTTTCA TTGATCCCAG GTCTTCAGAT TCCACCACTT GTCAACCACA 002720
002721 AAATATTTAA ATTTACCTGG AAGCCGCCCG CTTTGAGTTG TCCCGCCTTT CTGAACCAAA CCAATATATT CCTGCAAAAC 002800
002801 CGGCCATGAT TAAAACATCA AAAAATAATA CATGTTGGCG TGGCTGTGGT GAAAAAAGAA TACTTTTTCA CTGCTGGTGG 002880
002881 GTATGTAAAC TAGTACAACC ACTATGAAAA ACAGTATGGA GATTCATTAA ATAAAAGTAA AGCTACCATT TGATTAAGCA 002960
002961 ATTCTACTAC TGTGTATCTA CATGAAGAAA AAGAAATTAT ATGTGTAAGA CACTTGCACA CACATGTTTA TAGCAGCACA 003040
003041 ATTTGCAATT GCAAAAATAT GGAAGCAGC
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Predicted Small Protein

Name NONHSAT063906_smProtein_1685:1888
Length 68
Molecular weight 7660.22
Aromaticity 0.179104477612
Instability index 63.5404477612
Isoelectric point 7.71917724609
Runs 11
Runs residual 0.0208642650621
Runs probability 0.0186202245026
Amino acid sequence MIPFYCLVPSHKTTCDILLGPIHLAGVTLLFFSFLFFFFFLRWSLTLLPRLECSGMISAH
YSLCLLG
Secondary structure LLLEEEELLLLLLHHHHHHLLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLHHHLHHHHH
HHHHHLL
PRMN LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL
LLLLLLL
PiMo oooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiii
iiiiiii