NONHSAT063047

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT063047

Source

NONCODE4.0

Same with

,

Classification

sense

Length

4071 nt

Genomic location

chr19+:19463207..19468562

Exon number

4

Exons

19463207..19465012,19465164..19465254,19466073..19466200,19466517..19468562

Genome context

Sequence
000001 AAGCCTTTGC AGAGGCCAGC GAATGGGCCC TGCAGCTCAG GCCCTGGTGG GCCTTGGCCT CAGCACTGGG GATGCCACTA 000080
000081 CCCCGTCAAA ACCTGTAGCT GGCTCCTTCT AGAATGTGCT ATCACCCTGC CCTCAGCCTC TGAGCACAGT GAGGGCTGTA 000160
000161 TGTCCCCACT GGACAGTGCA AGTGGCCTGG GGGTGTGTCA GATGGGGAGG TTaaagtcac acagccccag accgcagaat 000240
000241 caggactgga acccagacct cactggctct gaTTTGTGTA GAAACCCCTG GAAGCTGCCT GGAGCAGGGC AAGGAGGGTT 000320
000321 GAGCAGCTGG TTCACTGCTG CTCCTGGCCC ATGTTTTAGG TGTTGTGGGG GCATCTTACA GAGCTCTTTT GGGAATCCCC 000400
000401 CTCTGCTCCc tgtgtccctg ggcccttgtc gggtgacaag cggcgcccaa gaactctcag accaaggtcc tggccttaag 000480
000481 tgactccaga tctcggggag acacagccag acacagccaa gccagtcctg tgaggtcagg ctggggacat ccagaaaggt 000560
000561 ggcagccttg ggggccgggA TAGTGTTGGT GCAGGCAGGG CAAGGTTGGC TAGGCAGGGG CTGCCACAGA GATGGGCACC 000640
000641 ACAGCAGTCA GAGCACAAGT GCCGGAGCAG ACGGCTGAAT GGCCACAATG GGCTCAGGTG AGGGTCCAGG GGCCCAGAAG 000720
000721 AGCTTGGGAT GCCCTGTCCT GAGCCTGTTA GGCTAGAGTG TCCACAAGAG CGGGACACCC CCCAGGATCA CTCAAGTCTT 000800
000801 CAAAACCAGA TTCTGTGGGG TACCCCAAGC TGGCATTGGG GGAACCTACC CAGGAGCGCT GAAGGAGGAC TCTCCTTCCC 000880
000881 CAGGCTGCTT TCAGACAGAG GTCCTTGGCT TTCTACAGGG AGCCCAGCCA GGCTCACAAT AAGCCAGGCC TAGCGGAAGA 000960
000961 GAGCAGTTTT TCTTGCTCTG AGGTTTCAAA AGGGCTTGGT GAATTTTAAA AAGCTCCAAG ACCCACCTGG AGCTCACTTT 001040
001041 CAAGGTGCAG CTACAGGGCA GTGTAGAGTT GTTGGGCTTT GTGTCTCAGG AGGAGCATCT CTGCACTCTG GAGAAGTATC 001120
001121 TGGTGGCGTC AAAGCCAGGT CTCAGGAGTT GGTTTTGGGG ATGTGTCCAT CTTGGCTTCC CAAGTGCTCC CTGGGCTGCC 001200
001201 AGGAGCCATC ATCTAGGGAA TTTTCCAGGT CTTACCTGAA CCCCACATCC AGGCTTACAG GGCTTTGAGT CCTCGGTCCA 001280
001281 GACAGGGTCA GTCCAGCACT GCTGGTCGCC TGTGTAGCAC AGGCTCCTGT CTGCCGTCTC CAGGCCCTTG CCATAGCAAC 001360
001361 AGGGATGGGC ATTTATGGGC CCTGATGGCT CTTACTGAGC TCTTCCTGCC ACATCCTGAG GATGCTAGGG CTGCAACTGG 001440
001441 GGTGGCCCTG TGCAGTCACA AAGCAGGGAG TCCGGATTGG AGGATTCTTA CATGCTGGTG CCCCCAGAGC CCCTGCGTGT 001520
001521 CTGCGGGGGC CTCCCATGAG AGCCAACTCA ATTGTGGAAG ACAAACCGGA GGGGCTGCTG CCCTTCTCAG AACCTGAAAC 001600
001601 CTGGAACCCT ATATGAATCT GCATTTCTGA TCAGCCCCCA TTGTGGGTCT AGGGCTAACG GCCATCAGTG CTTTTTCTCT 001680
001681 GCTTGAACAG GTAGAAGCCC CCAAAGTTGT CCATTGGCCA TGCCCCTGTG AGGGCATGAG CCAGAAGTGA GGGCAGTTTG 001760
001761 TTTTTCAGTG ATACTTCaga gagggccatt tgagatgggc tctgagGAGA GTAACAACAT GGTGGTGCCT GCCATGCAGC 001840
001841 TCGCCAGCAA GATCCCGGAC ATGTCGGTAC AGCTGTGGTC GTCAGCACTG CTGAGAGACC TGAATAAAGC CTGTGGGAAC 001920
001921 GCCATGGATG CCCATGAAGC CGCCCAGATG CACCAGAACT TCTCGCAGCA GCTGCTCCAG GACCACATTG AGGCCTGCAG 002000
002001 CCTCCCCGAA CACAACCTCA TCACGTGGAC AGACGGTCCA CCCCCCGTGC AGTTCCAAGC TCAGAATGGA CCCAACACCA 002080
002081 GCCTGGCCAG CCTCCTGTGA GGCCTTGATG GGGCCATCCA GCTCCGCAGG GCCTGCGCGT CTCCGGCTTC CACCCAGACG 002160
002161 GCACTCAAGC CTGCCCCCGA GGCGTGCTTC CTTCCTGATT GTCTCTAGAG CTTCCAAGTC CTGGGAATGT GCGGGGCCAG 002240
002241 TCCCTGCCCT CCCAGGAGGG GTGGTAGCCG TTCCCACCTC GCAGCAGGAC CCCCAGTGCA GAGGCTCACA GGTGGCACAC 002320
002321 AGGCGCTGTC TCTCCAGAGC CATCCTTCAG AGTGGACCTC AGTGCCAGTC CTGCCTCAGC ATCTGGGTCA CGTCGGCCAG 002400
002401 GAGTAGGGTG CAGGCCTCCA GCAGGTCCTA ATCCTGTGTG CCAGGGCAGG CAGTGCCCCA GGGGCACCAC GCCTGACTCT 002480
002481 CCATCACCCA GGCCTTGATG CCGAGCGGGA GTAGAGTGTT TCCTCTGCTC AAGGCAATTT CCAGAGCCCG GATGCCAGTT 002560
002561 TCTGGCCTGA ATTTGGAGGG AAGAAGTAAT GGCGCTAGTG TGGGACGAAG CACAGATCCC AGCACTTTTC CCAGCTTTCT 002640
002641 CTCCAGCATC AGTCCCTGCA GCAGCTGGGG CCTCTGGTCA GGAACCCTCA GGGACCCAGG AACTCAGCTT CCAAACATCT 002720
002721 GCACCTTGAC CGGACTCGCC ATCCCGCCGT GGGGGTGCAG GTGATTGTAA ACACGGGTGT GCATGTGGAT GCACACGGGT 002800
002801 GTGCGGTGAA GATCTGTGGA GATGGAGCTG GGAGCTGAGG CTCCTGTTGC ACCAGCCACC TTCCCCCATC TTGTGGCTGC 002880
002881 TGAGGGGCAG GAAGCGGGGG AGTGGGCTCG TCTCCTAAAT TTAAGATCAC CTCCTCAGCT AGCTTAGAGT GCGTGGCACG 002960
002961 GGCCCCCCGC CCCCGAGATC TGGAGCCCAG GGACTTTCTT CCTGGCAGAT CTGTGGCCTT CCCTGCTCAG CCTCTTGGTC 003040
003041 CCCCCACTCC CTCCACCGCC TCACCTTCCC TGCTGGGTCT CTGGGGCACA GTGTGAAACC CGCACCCTAG CCAGGCCCCA 003120
003121 GGGAGCCTCC GCTGGGCCCA GACAGCAGCG TTTGGTTTTA TCCACTTTTC TTGGATAATC AGGAGGTGCC CCAGTGGTCA 003200
003201 CAGTGTGGCA TTCCGAGTTG GGGCGGGTGG TCGGGTCAAG ATAGCAGCAG CAGGTGTCAG GGCTCAAGAC ACCACCCCCT 003280
003281 CCAGCTTCTG GGGCCCAGGA GCCTCTCCCT GCTACAGGGG GTGGGGGTCC TGCTCAGCAG GGTAGGTGGT GGTTTTAGGT 003360
003361 CTTGTCACCC TCACTCAGTG GAACTGCCTC TGGGAGCTTT GGCGTCTGTG ACTAAAGGGA CGCTGGATTG CTCAGGTCAG 003440
003441 CTGCTTGGGG CTCCCAGGCT GGGTGTGCCT TAGCCACAGG CAGGGCTGTC AATAACCCCC TTCCTCACTG GCCACCACCT 003520
003521 GACATCAGCA CCAGTGACAG GCTGGTCAGA GGGCGGGGCT GGTGAGGGTT TGTCCTAAGA GGACCACCGC CATCTCTGGG 003600
003601 TCTCCAGGGG GAGAGCCTGG CCCTGTCCTT TGCTACCCAG GGCTGCCCCC AGGCCCATGA AGCCAATAGG AGAGCGTGTG 003680
003681 GCACTGGCCC ACAAACTGTC CCTGTCCTGT CTTCCTCCCG AGCCATGGCC TCTGCTAGCT CCACCTTGAA GGAGCCCCCC 003760
003761 ACATCCTCCC CTACATCCCA GAGATGCCAC CACTTGTGTC TCCACAATGT GCTCCTGCCC ACCCGGGTTC CGCACTGTCC 003840
003841 GACCCCTGCA CACCACTCAT GTCACCACGG CGTGCATCAT GTTCATCCCC ATCTATTTAT TTAAGCCTTT CTTTGCTTGT 003920
003921 AGGGCATTTT GTATGTAGAG CAGTTGAAAA CAGAACCTCA GAACTTAACA TCTGTCCTGA TGTTAAAGTG CTTTTCATGA 004000
004001 CCACCCTGTT ATCTATGTAT ATGTAAAGTT AAGGATGAGA TCTTAAGTTT ACAATTAAAA ACTCAGTACT C
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Predicted Small Protein

Name NONHSAT063047_smProtein_728:952
Length 75
Molecular weight 8248.1421
Aromaticity 0.0675675675676
Instability index 73.85
Isoelectric point 6.01824951172
Runs 9
Runs residual 0.0210283454186
Runs probability 0.0210013935505
Amino acid sequence MPCPEPVRLECPQERDTPQDHSSLQNQILWGTPSWHWGNLPRSAEGGLSFPRLLSDRGPW
LSTGSPARLTISQA
Secondary structure LLLLLLLLLLLLLLLLLLLLLLHHHHLEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLE
ELLLLLLEEEEELL
PRMN -
PiMo -