NONHSAT061433
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT061433 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1257 nt |
Genomic location |
chr19+:14818806..14820062 |
Exon number |
1 |
Exons |
14818806..14820062 |
Genome context |
|
Sequence |
000001 GTTACttctt ctttttttat tttattttaa ttgagacagc atctcgctct gtcacctggg ctggagtgca gtggcacgat 000080
000081 ctcggctcac tgcaacctct gcctcccggg ttcaagcgat tttcctgcct cagcctcccg agtagctggg attacagggg 000160 000161 tgcgctacca tgcccggcta atttttgtat ttttagtaaa gacggggttt caccatgttg gccaagctgg tctcgaactc 000240 000241 ttgacttcag gtgatccgcc cacctcggcc tcccaaagtg ctgggaccac aggtgtgagc caccgtgcct gaccTATTTT 000320 000321 GTTACTTCTT GAAGCGGGTA ACACCACTAC TGTCATCCGA TGGTGAGATG GGGACCAGGA AACAGTCACA AAGAAAACAC 000400 000401 CGACCCCTCC TCCGTGGAGC TCACGGTCAG CTGGGTGGTC AGAGTTCGAA ATGAATAACA GAGTCCAGTG GAAGTGTGTT 000480 000481 ATACAAGGAC TTCATCTCAG GGGACGGGAG AGTTCTGGGA AAGGATGGAT ATTTAAGCTT AGGCCAGGGT TTCTCAACTG 000560 000561 CAGCACTGCT GATAATGGGC Tactgcagca ctgctgataa tgggcctgtt cactctcagc tgtgggccgt cctgtgcatt 000640 000641 ataggatgct gagcagcatc cctggcctca actcactaga tgctacgagc acttttcctc tatgagtttg ctagggctgc 000720 000721 catatcaaag ttccaccagc tgggtggatt aaacagcaaa aatatattgt ctcaccgttc tggaggccag aagctcgaga 000800 000801 gcaaggtgtt ggcagtgttg gttccttttg aagcctctcc ttggtgtgta gatggccatc ttctctctat atcttcacat 000880 000881 catcttccct ctgtccatgt ctgtgtccaa atgtcgtctt cttgtgatag ggtttggatt tgtgtcccca cctaaatctc 000960 000961 atgtcaaatt gtaatctcca gtgttggagg aagggcttgg tgggaggtga ctggatcatg ggggtggact tcccccttgc 001040 001041 tgttctcttg atagtgagtg agttctcacg agatctggtt gtttaaaagt gtgtagcacc tcccccttca ctctcttcct 001120 001121 cctgctccag ccatgtagca cgtgcctgct tcccctttgc cttccgccat gattgtaagt ttctcgagtc ctccccagcc 001200 001201 atgcgtcctg tacaacctgt ggaaccagga gccaattaaa cctcttttct ttataaa |
Predicted Small Protein
Name | NONHSAT061433_smProtein_851:973 |
Length | 41 |
Molecular weight | 4477.4897 |
Aromaticity | 0.125 |
Instability index | 52.5775 |
Isoelectric point | 10.0327758789 |
Runs | 9 |
Runs residual | 0.0469758064516 |
Runs probability | 0.0532493277591 |
Amino acid sequence | MAIFSLYLHIIFPLSMSVSKCRLLVIGFGFVSPPKSHVKL |
Secondary structure | LHHHHHHHHEELLLLLLLHHHHEEEEEEEEELLLLLLEEL |
PRMN | LLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLL |
PiMo | i??????????????????????????????????????? |