NONHSAT060167
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT060167 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1367 nt |
Genomic location |
chr19-:781002..783334 |
Exon number |
2 |
Exons |
781002..781237,782204..783334 |
Genome context |
|
Sequence |
000001 ATACCCAGGT GCCCATGTTT ATCTCCACGG CGCAGCCTCC GGGTTCTGGA ATTTTCTTGG TCACTTCCAG ATATTGTAGA 000080
000081 GAATTCCGGA AGAGCACCGC AGACAGCCCA GGCGCGGCCC GGCCGAGGCT TAAACACGTT TTCTTAAATC ACCAGATTCC 000160 000161 GCCACCAACC TGCAAAGTTC ATGGTTTTTT TCTCTCTGCG AAACTCTTGC CTTTGAAACC TCCTGCAGGG GTTCCTGTAC 000240 000241 CCCCAGAGAT TGAACAATTC AAAACCTTCA GGACCCCTGT CCGGAGGCCC CCAAATCCCC TTTGGTGAGG GCTGCGGCCG 000320 000321 GCGAGGAAAG GGCGCTTGAC CCTGTCACGA AAGCAAATTC GGTCGGGTCC TCCAGAACCA CCTTCTCATT TTCTCCTGTT 000400 000401 TACCTCACAG CCAAGAATGA GATAATAAAA CAGAGAAAGA AATAGAGACG GGAGGGTTGG GGGCAGTTTC CACGGTTTCT 000480 000481 TCAAGCACAG TTCCTGCAGG GTTGTCTGGT TTGCACAGAG AGGCTGTTGG CTCCTGGACG TGGGTCCTTG GGGGACCTTC 000560 000561 GATTTCTCGC CGGGTCCAGG GTGGCCCCGG CGGGAGGAGG ACCTCGCCCA CATTCCTGGG ATTCCTTCTC TCCTTCCCAC 000640 000641 ATTGTTTGTT TGTTGACTTT AAATTGGACT CTGCCAGGAA TTCCTTTTCC TCTTGGGTTT AGTGGTGAGC AGGAGGGACT 000720 000721 TAGCATATCA CAGAGCCCCC GGCAGCCAAG CTACCGGGTG TCCTGGCCCC CTTCAGTTCC CTCCCTTGTC CTCCTCGAGG 000800 000801 ACCCCCCAAC TCAGGCACCC ACACCACGGG GGGCTGCGGG ACCCCGAGCC TCACTCGTGC CACCGGCCAC CCAGCGTCCC 000880 000881 CTGCATCTTC CCCGGGGACT CACACACCGC CTCGAGGCCA CTCCGCCCCT CCGGATGGAT GTCCAAGCCT CCAGCCAGGG 000960 000961 CCCCTTCCCT GCTTCATCTC CAGGGTTGAC GGAGGTCGAA GGAGCACATG TCTGCTTGCA GGGCACGCCA GGTCCTGATG 001040 001041 GACACTGACG TCTAGACCTA GACGGTGGCT CAGCCTGAAC CCTGGACGGC CTGGAGCACA GCCATGCAAC TGCTTCTAAG 001120 001121 ACAAAACCGA GCAGGAGCAT CTGCCAACGT CTCCACATTG TGGACCTGAG ATTGTTCTCC GGAAGCTGCA GTCGGAGCAT 001200 001201 CGCCAGGCCC AGCCCTGGGT CCTCCACCCG GGCCACTGCC TCTCAGGCGG CCTCTCCCTG CCCCCGCCCC TCCGGGGCCC 001280 001281 CACAGGGCGG CCAGTGCAGA CCTGGGTGTG CAACGGCCCC ATCAGCGTTT GTTTCATGAA CAAATAAATG TCTAAATTCA 001360 001361 GGACCCA |
Predicted Small Protein
Name | NONHSAT060167_smProtein_14:307 |
Length | 98 |
Molecular weight | 10871.6768 |
Aromaticity | 0.103092783505 |
Instability index | 54.7690721649 |
Isoelectric point | 10.9755249023 |
Runs | 15 |
Runs residual | 0.0231004200076 |
Runs probability | 0.0469469469469 |
Amino acid sequence | MFISTAQPPGSGIFLVTSRYCREFRKSTADSPGAARPRLKHVFLNHQIPPPTCKVHGFFL SAKLLPLKPPAGVPVPPEIEQFKTFRTPVRRPPNPLW |
Secondary structure | LEEELLLLLLLEEEEEELLHHHHHHHHLLLLLLLLLLLLLEEEELLLLLLLLEEEEEEEE ELEELLLLLLLLLLLLLLLLLEEELLLLLLLLLLLLL |
PRMN | - |
PiMo | - |