NONHSAT059552
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT059552 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
842 nt |
Genomic location |
chr18+:56829409..56836136 |
Exon number |
2 |
Exons |
56829409..56829480,56835367..56836136 |
Genome context |
|
Sequence |
000001 gccaggatgg tctcaatccc ccgatctcgt gatccgccca ccttgacctc ccaaagtgct gggattacag gccacaaata 000080
000081 catggaaatt aaacatgctc ctgaatggct actggtcatg aaaaaggaaa ttttaaaatt tcctgaaaca aatgaaaatg 000160 000161 gaaacacacc atacccaaac ctgtgataca gcaaaagcaa tataaagagg aacatttata gcaataaaca cctacatcaa 000240 000241 aagtacagaa agacttcaaa taaataacct aactagaaaa gcaagagcaa accaaaggca aaattactag aaaaatttat 000320 000321 gatcagagct gaaatttaaa aattgagact aaagaaaact acaaaacatc aatgaaagaa agtttttttt tttaaaaaaa 000400 000401 taggtaaaca aggttgctgt ttgaactctt gtgaaggtgg cttgcactgc cgtgaggttc ccggccaagc aggacaggtt 000480 000481 tatttgtatc tatcctgctt ttttaaataa taagaagacc atcgcagagg gaaggcgaat ccccataagt aaggctgttg 000560 000561 aaaatcctac agctacagag attcaagatg tatgttcaga agttggactt aacgtatttc ttgagaaaaa ttaaatgtac 000640 000641 tctagagaat ggaatcgtga tgtccaatac agaggcagct caaacaggtc cagctcaaac aggaccagct caaacggctc 000720 000721 cagctcaaac aggaagatgg cggcctctgc cttgtacagt tcccatcatg taagtcagta atgttgtatg cagcagaaat 000800 000801 aatacctaaa ctaaaacgaa ggacacaaaa aacaggagga gg |
Predicted Small Protein
Name | NONHSAT059552_smProtein_587:772 |
Length | 62 |
Molecular weight | 6708.7859 |
Aromaticity | 0.0655737704918 |
Instability index | 53.1901639344 |
Isoelectric point | 9.23638916016 |
Runs | 9 |
Runs residual | 0.00527605049934 |
Runs probability | 0.00752713497811 |
Amino acid sequence | MYVQKLDLTYFLRKIKCTLENGIVMSNTEAAQTGPAQTGPAQTAPAQTGRWRPLPCTVPI M |
Secondary structure | LEEEELLHHHHHHHHHHHHLLLEEELLLHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLL L |
PRMN | - |
PiMo | - |