NONHSAT059144
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT059144 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
678 nt |
Genomic location |
chr18-:44383187..44383857 |
Exon number |
1 |
Exons |
44383187..44383857 |
Genome context |
|
Sequence |
000001 GTGGGTAGAG CAGTGCACAG TGGGGATAAT ATGGGAGTAG GTGTATTAAA CCTGGAAGTG TAAGCAACTC CTTGTAGACC 000080
000081 CACCCTACTG TGTATAAAAG GCTGGAGAAA TTCTTCATAT GATCTACTCT AGGTTATGTA CTGAGGACCA CCTTATCTGG 000160 000161 GTCAGGTACA CTACACAGAG TGCTACAATA TAATTGTAAA CATAATTTAT CCTCACTGTG ATGGCTAGCC ACCTGACCCA 000240 000241 AATCATTATT AGACTCAATA CTTTGGAACT GGAACAAAAA TCAGTTGACC TGATGTCTGA AAGACATGCC CACCTGCTAT 000320 000321 TTGACAAGCT ATAGACATAT CCTACCAATT GATGGGTAGT AGCACTGAAA CTATGAAAGT GGATGAACTC ATCCAGAGGA 000400 000401 GTTGATGAGT GAGAAAAGAA GACTGGAAAA GGAACACAAG GAAATCAAGA AGCAGCAGCT GAGACTGAAG GAAAATAACG 000480 000481 TGGTATTACA GAGGCCAAAA AATAGAGTAT TTCAAGAAGC AAGTGGTTAG TGGAGTTAAA AGCTGCTGAT ACAACCTAAA 000560 000561 AAAGTAAGTA TCCATTTTTT AAAAAACTTT CATTTAAAAT ACCACCATAT TTTATTGAAT CTAAGTACCT GATTGTAAGA 000640 000641 CATTAAAGAA AAATTAAACC TGCTAATTAA AAAAAAAA |
Predicted Small Protein
Name | NONHSAT059144_smProtein_404:529 |
Length | 42 |
Molecular weight | 5003.7476 |
Aromaticity | 0.0243902439024 |
Instability index | 84.0926829268 |
Isoelectric point | 10.3643188477 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0215888157065 |
Amino acid sequence | MSEKRRLEKEHKEIKKQQLRLKENNVVLQRPKNRVFQEASG |
Secondary structure | LLHHHHHHHHHHHHHHHHHHHHHLLEEEELLLLLEEEELLL |
PRMN | - |
PiMo | - |