NONHSAT059092

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT059092

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

4005 nt

Genomic location

chr18-:42256133..42260137

Exon number

1

Exons

42256133..42260137

Genome context

Sequence
000001 CCCGCCCGAC TCTGCCGCCT CCGCCGCGCC ACCGATTTAT GGAGAGAGAT ATCAAGGGGG AAAATGGCGT CTCCGGAGCC 000080
000081 CGAGGAGTCC TGGAGTAATC ACATTcacac acacacgccc gcacgcacac acactcgcac acacTGGCAC ACAGGCGCGC 000160
000161 GGCGAGCCCT GCTAATTTTA GCAGGAGCCA AAAAAAATTT tatatatata tatatatata tatatatata tatatCCCCG 000240
000241 TCTCTCCGAT CAATGCtttt tctttttttg cttttttttt tttttttttt tttttttttg cttttcttCA AAGGATGGGT 000320
000321 TGGAGCGTTA AAAAATGTTG GTGGGTTTGG GCTCGCAGGA GGCGGCGCGC GGAGGGCGAG GGCGCTTTTG CTGAGCTGTG 000400
000401 CAGTTCGGTC CGCTGAGCCC GGCGGCCCTG CCCGCCCGCT CGTCCGCCCG CGGTCGCTAG TGTTgccgcc gccgccgccg 000480
000481 ccgccgccgc tgctgcTCCA TGGccgcgcc cgccccgcgc ccccgccgcg tcccgtcgcc gcccgcccgc gtccccgGTG 000560
000561 AGCGCTGGAG TGGGGTCGGG CCCGTGTGCC TGCCTCCCGC GCCCTCTCCG AATCCCGGAC TCCTAGTGAA AGGAAGGGGG 000640
000641 AGGGCGCGGG CGCGGAAGGG AGGTGGATCG GAGCGGCAGC GCGGCCCAGC CGAACGGGTA CCGACCGTCA CCCCGCGATC 000720
000721 TTCCTCGCAG GGGGCGCCGG CGCCCAAGCT GCTCGCCCGG AGGGCCCAGA GCCGCTTCCC AGACCAGAGC CGGGGGAGGC 000800
000801 GCAGCCAGTA GCGAGCCCTG AGCGACCTCT CTCCCCACTC GCCCCCCTGC CCCAGTGAAT TTCTGTCAGT TGAAGGGAGC 000880
000881 GGGGCTCTTG CCCGGGGAAA AGGAAAACAG TTCGTGGCCT GGGATCTGGG ACCCCTTGCC GCCCCCAGCG CCCCTCCCGC 000960
000961 TCCCCGGCGC CCTTGCGGCC CAGTGGCTCC TGCGCGCCGG AGTCCGCCGC GAAGACTGAG CGGCCGCGGG GATCGCCGCG 001040
001041 GGCTCCGCGC GTATTCCTGG GCTCAACACT GCCACTATCT GACACAACAG GAGCAGTGTC GGGGGGGTAC TGCGCGCCCA 001120
001121 GACGTGAGCT GTGATAGGCT CTCGAAACTG GGCGCATTTT TTTTTTAACC TGGTAATTAT ATTTCACTTT CAGGGttttt 001200
001201 ttaaattatt attattattt tattGTTGTT GTTAAGCGAC TTGTATGCAT TCAGATCTCA TGTGCATTTT CTCGTTATTC 001280
001281 AAGAGAATTG GACACTTGAT GAAGGGAAGG ACACGGAGAG ATGACAAACG CAGACTGGCA TGCAGTTGTT TTCAGGGTGG 001360
001361 GAAGAACAAA GTGGAATGTC TTCAGTTCTT ACAAAATATG GTGGCATTTG TAATCTCTGA GTTTTTGTAT TTGGCCTACA 001440
001441 AAGGGGGTCT TTTCAGGGAA ACACGAATGG AACCCTTCAG AGACATGTCT ACATTGTAAA ACAATATAGG ATAGATACGG 001520
001521 ATTCGGGAAG GTCTGCAAAT GGTTCCGCTC AAAGAACTTG GGGTAAAGTT GACCGAGGAC TCGGATTCTG AGAGGACTCC 001600
001601 TATCACGTTC TTCATGAGAG TTTTAGGCTA TTTGGACTGA GGAATGATTT GGAGGTACGT CGGGGGCATT CCCTCACTGA 001680
001681 GGCCATCAGT GGCTGCCTCC CTGCATTGGC TGCTGGTTTG AGTTCCTTCA CAGAACTTCT TCGTCAAGTT TTTCATAGGA 001760
001761 ACGCTGCAGT GAAGTGGAGT GAAAGAGACT GGGGATTGAA GGGTGAACCC CTTCCAGCCC CAATCCCATC CCGATTCCTG 001840
001841 TCTGGATGCA GATTCAGTCT GACTCAGAAC GGATAGTTCA CCCTTTTACT GATCCAAGTG CTCTGTCCTC TTTTTTTCAG 001920
001921 AGGAATGTTC TGACTGGCTA CAAACTTTTC TTCTGTCACT GCAGGACCTC CCGTGGAGCA ATTTTCGATA GGTCTTCTAC 002000
002001 TATGCTTTTT TACCGCGTCA TTGTTATTGC TGAGAAAATA ATGCTTAGTT AGGAAAAAAA ATAGCAGAGC ATATGAGCTG 002080
002081 ATGATAGAAG TAGAGATCAA GGCACAGAAT ACAATATCAA AACAACTATT CTCTGTAATC AAATGACCTT TCTCATTTGC 002160
002161 TTGTACACCC AGATTTCTGA AATCCTACAC CAAAGTCCAC AGAGAACTAA GATAGCATGT GGCCTATTCC CCGCGCTTTT 002240
002241 CCAGTGGAGA AAGTAGCCCC AGAAATCAGA AGGGTTTGTC CACAAGCATA TGGCTGTCTG ATGTCATCCA AACCAGAACT 002320
002321 AAAGCCTATT GCCCTAGTCG TTTCCCTTCT ATAACCTAGG CGTATTTACA GAGTCTTCCT TCCTGTGGTG TTGTGTGGAT 002400
002401 TAGAAAAGTA GCTAAGAAAA GCACATACCT TATTAAAATT CACTGCAATA GATGATAAGT CTGtagaatt atagtgcagt 002480
002481 agaagtttac ctgtgagatc atctattaga atcccatctt tttaaaactg aggaaacgat gcactacccc aagccactaa 002560
002561 gttaattcaa agccaggaat agatgctatg ttccttgact tcttatccaa cgttccttcC TTGTATGTAG CCCATCTCTG 002640
002641 AATCATGAGA GGGGAGAGGA GAGAAAGGAA AGGAGGGATA TTCTCACTCT CTTACATATA TATGAAAAAA TATATATGCC 002720
002721 TCtgtgtgtg tgtgtgtgtg tgtgtgtgtA cacacaccca taataatgtt tcagtgaaca acagaccaca tatattactg 002800
002801 tgatcccata taatataata ctgtattttt gctgtacatt ttctgtgttt agatacacaa atacttacca ttgtgttaca 002880
002881 tttgcccaca gtatttagta cagtaatatt ctgtacaggt ttgcagccta gaagcaatag gctaccccat atagcctgag 002960
002961 tgtgcagtag cctatatcat ctagatttgt gtaagtgcac tccatgatgt ttgcacaaag tcgcctactg atgtatttct 003040
003041 cagaacacct ccccataagc taattgacgc atgattgGAG atatatatat atatatatat atatacacac acacatataa 003120
003121 atatatatac atatgtaAAA TAGATACaat aaatatttta tacacattaa tatttttggt atataataat atattacaaa 003200
003201 tataaaaatt ttaatatatg ataataaaGG ATTTCTAAAA ACTAAACCCC CATCCCTAAA CTGTACATCT GTTAATAGAA 003280
003281 TGGGACCTAT ATTCAAATCC TAGGTGAATG TCACAGGAAT TCTTCTCATT TTCTTTCTCA ATTAGACCAC TTTGTGATCG 003360
003361 TCTGAGAAAC AAACCTTGAC ACACAGAAAG TCTGAACTTG ATCTAGCCTG AAAATAGAGT CAGGCAATTT TAAGATACCC 003440
003441 ATTTCCAGGG CCCAGGAGCC CTTGAAGAAA TCAAAAGGCC ATCCGAGCAC TTGATGAGAA TGCACAGGAC ATACATCTTT 003520
003521 TAGTCTCACA CAGTCTCCAG TATCAGAATC ATGCGGGcac tcagcaaata tttatggagc atggtgatgt gccagataca 003600
003601 ttagtagcaa ctggagatac aaatgtgacc aagacatagt ccccatcctc acagaattca tgacctagtg ggaaagactg 003680
003681 acatgCGAAG CTCTAACTAC AACGAATGCA CAAAAATATC AGGAAGAAGA GGCTTACAAA GTGTGTGGAG TACAGATGCT 003760
003761 GAAGTGGTGG GAGGAGAGTG GGGTCTGAAA TCATGTCTTT TTAAAATTGC TGCACATTTA TTTTCTATGT GTATTTAACA 003840
003841 TACACTTTTC ATTTTCCCCT TTGCACACAC ATGTATTTTT TTCCATTACC TGTTTTCCAA CCAAATATAA AACTTATCAG 003920
003921 GACTAGGCTG TGCCTTGCAT GGACAATGTC AATAAATGTA GTTGAGAATA ATTGTTCCTC TGATATCACC AAATATCTGA 004000
004001 ATTGC
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Predicted Small Protein

Name NONHSAT059092_smProtein_1244:1498
Length 85
Molecular weight 9919.6785
Aromaticity 0.119047619048
Instability index 72.6238095238
Isoelectric point 9.69122314453
Runs 9
Runs residual 0.0268425841674
Runs probability 0.0397063730398
Amino acid sequence MHSDLMCIFSLFKRIGHLMKGRTRRDDKRRLACSCFQGGKNKVECLQFLQNMVAFVISEF
LYLAYKGGLFRETRMEPFRDMSTL
Secondary structure LLLHHHHHHHHHHHHHHHHLLLLLLHHHHHHHHHHHLLLLLHHHHHHHHHHHHHHHHHHH
HHHHHHLLLEEELLLLLLLLLLLL
PRMN -
PiMo -