NONHSAT059045

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT059045

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1710 nt

Genomic location

chr18-:39060236..39100561

Exon number

6

Exons

39060236..39061231,39061846..39061921,39062409..39062541,39081084..39081240,39096384..39096519,39100348..39100561

Genome context

Sequence
000001 TGGAGCCTGT CAGCTGAGCA AAGGAGGGAA ACTCAGGATG GAGAACTCCT CCCCCTCCAT CCATAAGTGG CACACCACTG 000080
000081 GCCTCCTGGT GTTATTAAAG GAAAATTGGA AAAGTTTCCA GAAGATTAAG CAGAAAGCTT ACAACTTGCA CAAGACTCTC 000160
000161 AATTTTCCAG TGGCTCTGAC AGAAGGATAA ATCTTCGGCT GTTTTAACTA AAATGGACGG TCAAGTTGGT ATCCATCGTG 000240
000241 AAGCTAAATG AATATCTGGA CAGGAGTCAG ACAAAGGGAA GGAGAATCCA GGGGAAGATG AAGCAGCTGC AGGCCTGTCT 000320
000321 GCTACCCTAT ATCCGGGGAA GAGCCAGAAA TTGCTGACCA TAGAGAGTTA CATTGTCCAG CTTTTCCTCC ACGAAATGGA 000400
000401 GCAGCAACAA AAGGCCAGAT CATTCAACCT ATGCTTCCTC AAGTCTGATA ACATTAGCGT TTCTCTCAGA TATCAGTTCA 000480
000481 AGTAAGGAGT TGCCAATAGA AGCAAAGATG CCAGGAATCA TCGTTTTTAT TTCAGTGTCC TTACGAAGAC CTTTGAGCAC 000560
000561 AATGGAACGA TGAGGCAACA TTAAATATTA CTGGAATGGG GTATGAAAGC AGCTACTAGA AAATCCTGCA AGAAAAATAG 000640
000641 ATGGAGAAAC TGAGTGCTAA GAGTCTTGCC TTTTAGCTGT CAACAGTTTG AAGATGAAAC AAATCTGGAA CAGCTGATTT 000720
000721 CTATTGTGGC AGCTATTACC CATTTTTGTT ATGCATCTGT CTCTTCCCAG ACTATAAATT ATTTAAGGTG TGAGTCGGAG 000800
000801 ACCTAGGCAT TTCTTATGGC CAGAACCTTA AGCAATGTCT GGGATATAGC AGATATAACA GACTCTCAGC TATTGCGTGA 000880
000881 ATTAAGGAAT GAGCTTGAGA AATACTTTTA AGTATTTTCT TCCTGGAAAA GAGACTCCAA CTGTCTTTTG TACAGTGCTT 000960
000961 GAAACTCATA CCATTAATCA CTCTTTGAGA CTAAAGCTCT GATAACCTGA GTGAAGAATT GGTTACAAGG ACGTTACAAT 001040
001041 GCACCATGCT ACCTTCAGCC ATTTGTGCTT CTGCATAAAT TGTTTTGACC GATTAGCCAA TCAGTCACCA ACAAGACCCA 001120
001121 AAAGGAATGA GAATCTAAAC AGATTGTCAC CATTTGGTGG GTTTGAACAC CAAGAGGATA GAGCCTAGAG CATTGTGGTC 001200
001201 TGCTTTAAGA CTTCTGAGAG GCAATAAGGT AAGGTCTGAA AAACCAAGAG TCGGGATAAA CAAGTCAATT GTGTATACAT 001280
001281 GGAGGTGGGA TGAATAAAGA GGAGGAGGGG TTGATGGAAG AAAACTGCAC CCAAAATTAT CGTGTGTCAA AGGCTGGCTG 001360
001361 TGGAGCCGAT CTTACAACCT CAAATAATGT GATCATACTA TCACTCAGCA TAATTTGTGC CCCCCAGTTT TGTATGTCTA 001440
001441 GGCTGCTTAG GAAATTGATG AATAACAGAA GATGCCACTT ATCACTGAGA TGAACCAAGT CATCCCAGAG GGAGTACTAT 001520
001521 TTGAAGATGT GTGGAACATT CTGTGAATAT AGAAAAGGAT CCCATACCAT GATTCAATTC ATGACTGTGG CTAGTAGAGA 001600
001601 TCCACATTTC ATGTTTTGCT ATCCATGGGA TTTAAATCTG CTGTCACTCT CCTTCCTATG CAGCTTAGAT TGCTTGACCT 001680
001681 AACATTACAA TTAAACCTTA CATAAATGCT
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Predicted Small Protein

Name NONHSAT059045_smProtein_1289:1492
Length 68
Molecular weight 7619.8543
Aromaticity 0.0298507462687
Instability index 65.928358209
Isoelectric point 8.75103759766
Runs 11
Runs residual 0.0208642650621
Runs probability 0.0408536879125
Amino acid sequence MNKEEEGLMEENCTQNYRVSKAGCGADLTTSNNVIILSLSIICAPQFCMSRLLRKLMNNR
RCHLSLR
Secondary structure LLHHHHLLHHHLLLLLLEEELLLLLLLLLLLLLEEEEEEEEEELLHHHHHHHHHHHHHLL
LLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL
LLLLLLL
PiMo ooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiii
iiiiiii