NONHSAT059013
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT059013 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1159 nt |
Genomic location |
chr18-:36737732..36817995 |
Exon number |
4 |
Exons |
36737732..36737860,36746339..36746766,36788510..36788753,36817637..36817995 |
Genome context |
|
Sequence |
000001 TTCCTCTCCT TGGCTGTTGA GTCTTGGGTT TCCACTTGTT AAGGCTGGGC TTGTTTAACT CCTCTGATTC TCCTCGCATC 000080
000081 AAGAAGACAG TTTCTTACTG TAGCAAGCTG CACCCACCAT GAGCCACATG GGAAGGGCTG AGAAAGGCCA CTTTTGACAG 000160 000161 CCTCCTATTG AAGCATGCAG CAAAGGGAGA CAGGGAGGAA TAGATTCAGA CGGAATTGCC TTAAACTCCT CCATGCATAT 000240 000241 TTATATTTGA AAAAAAGTGC TTGGAACTAA AAGTCAAGAA ACCTATTTTC TACTATAAAA TTTTATTTAT TTTCTGTGAC 000320 000321 TTTAGGTAAG TCAGCAATCC CTTTAAATGA AAAATGTTTG GGTACAAGCA ATTTTCCAGT CTTGACCCTT TATCTGTTGA 000400 000401 CCAAGCTAAG GCAGAAACCA GCTAAATTCT GGATTTAATC TTGAGCAGCA AAAAAGATCA GCTTTTGAAG TGGATCTGCT 000480 000481 TTTATTCTTG GCAAAAGTTC AGCGGAGACC AACCAGAGTG GTGACAAAGT TCTTCAACAT CAAGCCAAAT GTAATACAAG 000560 000561 GAATTACGGA TAGTGCTTAA TCTAAAATAA AGAAATTCCA CATAGAACTT TAAACTTTAC TAAATTCACA GGGAAGGGAG 000640 000641 ATAGAGAAGG AGACATAGAT GTTAAAAAAA AAAGAAAACT TTTTTATTTT GCATTCACAC CACTACTAAC ACCAAATGTC 000720 000721 TGGAGTTTTT ATACAGGAAG CATTTCTCCA ATTTTCCTAA CACCAACCGG GTATTTTACA ATTTAATTCA ATTCTGACAT 000800 000801 GATCTACCTG AAGTTGTGGT CAGATCCCAC AAGTTAAGGG GTCAATTTCA TTAGACTGCC CCCATTTCAG ATGTCAATCA 000880 000881 CAAATCTGGG CTTCCAGTAC TTTTGACCAA CTGGCTGTAA ATTGGGGATT TCCATGATCC CTTCCCTTGG GTTTAATAAT 000960 000961 TTGCTGGAAT ACTTCACAGA ATTAAAAAAA AAACTTACAT TTACTAGTTT ATTACAACTG AGGAAATGCC TGAACTACAG 001040 001041 TCCTATTTTT GCATACTAAG TTCTCTTACC CTCTATTTAT CTCTGCCTCC TTCACAAATA GGGTCTCATT ATGTGTTCTC 001120 001121 TGAAACTTCC TTACATTTGT CATTCCATTG ATGTAAACG |
Predicted Small Protein
Name | NONHSAT059013_smProtein_1025:1150 |
Length | 42 |
Molecular weight | 4674.3069 |
Aromaticity | 0.146341463415 |
Instability index | 86.9804878049 |
Isoelectric point | 5.71697998047 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0450198097257 |
Amino acid sequence | MPELQSYFCILSSLTLYLSLPPSQIGSHYVFSETSLHLSFH |
Secondary structure | LLHHHHHHHHHHHHHHHHLLLLLLLLLEEEEELLEEEELLL |
PRMN | - |
PiMo | - |