NONHSAT058945
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT058945 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
644 nt |
Genomic location |
chr18-:33466616..33467302 |
Exon number |
3 |
Exons |
33466616..33466667,33466703..33466734,33466743..33467302 |
Genome context |
|
Sequence |
000001 GTTTCCTTCT TTCTTTGGTA AATTTCTGAC TGTAAGTGAT GCTCACTGAA CCTTGGTTTT CTTGCTTCCT TTTCAATCCT 000080
000081 TCTGTCTGTG CCACTTACTA GCATCACAAC TGCTCTATTG AAATTGCTTT TTAAAAGTCA TGAAGTTGCA GATCACAGAA 000160 000161 TCCAAGTAAA GCCATCTCCT TAAAGCTGGT CTTTACTCCC ACTGTGCTTT GGATAACTTG TATACTGAAT CCCTGATTCC 000240 000241 TGACCTATGA TTTATGGGGT GTGTGTGTGT GTGTGTGTGT GTGTGTTGTG TGAGTGAAGA TCTAAATAAG TTCATGTATT 000320 000321 GTCTAGAGGA CCTTGATCTT TCTACTCAAT CTCTACTTAC TTTGGAGCAC GATAATGCCT CATCACAGTT CCTTACATAC 000400 000401 GCAGAACCTT ATTAAATGTT TGCTGAGCTG TGTAGTAGGC AGAATAATGG TTCCCCAAAG ATGTCCACAT TCTAATCCCA 000480 000481 GGACCCTGTG AACATATCAC ATGGCAAAGA GGAGTTAAGG CCAGAGTTGG ACTTAAGATC ACCAACTAGC CAAGTTTAAG 000560 000561 AGCATCATGG ATTATCCAGG TTCCTTAAAA GTTGTGGGAA GAACTCAACC TGCTATTGAA GGTGGAGGAA GGGAGCACAA 000640 000641 GCAG |
Predicted Small Protein
Name | NONHSAT058945_smProtein_374:490 |
Length | 39 |
Molecular weight | 4305.1115 |
Aromaticity | 0.0 |
Instability index | 42.0578947368 |
Isoelectric point | 9.80487060547 |
Runs | 5 |
Runs residual | 0.0410318559557 |
Runs probability | 0.0380851439675 |
Amino acid sequence | MPHHSSLHTQNLIKCLLSCVVGRIMVPQRCPHSNPRTL |
Secondary structure | LLLLLLHHHHHHHHHHHHLLLLEEEELLLLLLLLLLLL |
PRMN | - |
PiMo | - |