NONHSAT058652
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT058652 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
584 nt |
Genomic location |
chr18+:20729673..20838103 |
Exon number |
3 |
Exons |
20729673..20729939,20768802..20768873,20837859..20838103 |
Genome context |
|
Sequence |
000001 agaaacacga tccccaggcc cagcctcaga cccactgggt cagaagctct ggggcggggc ccagcaatct atttcaacaa 000080
000081 ggccccaact tgcgcctgtc gcccgttcag gcttgggagc agccactgTG GACAAAGCCT TGTGTACCTC CAGCTTTACT 000160 000161 GGACCTTCTG GAAGATGTGA ACAGTGTCTA GTGCTCCAGA AAAGATTTTA TTTATTCTAG CACAAATGGA CAGAAGTTAT 000240 000241 CGCTGATGTG GGGGCTCTGC TATCCAGACG GCGCCTCATC TCCCAGAGAT CTTCCTTGGA GACCCTGGAA GATATTGAGG 000320 000321 AGAACGCCCC TCTCCGGAGA GATACTGCAT CAGCCCTAGA CCCCCAGAGC CAGTCCCGCC CTTTACAGAG CAGCCCTTAG 000400 000401 CCTGGGGCCA TGGGTCAGGC TGACCTTCAA CAATTATTTC TAGATGATTT CTGGATAAGA ATTGCTCTCT CGGTACCAGA 000480 000481 CAGTTTGACA TCCTCCACCC TTAGAAAATG ACTGACATTG TTTTGTTACT GCTCCTACCC ACCAAGGGGA TAAAGAAGGC 000560 000561 GAGTTCTGAG TGTTGGATGA GTCA |
Predicted Small Protein
Name | NONHSAT058652_smProtein_245:358 |
Length | 38 |
Molecular weight | 4330.9915 |
Aromaticity | 0.108108108108 |
Instability index | 67.0027027027 |
Isoelectric point | 9.29888916016 |
Runs | 7 |
Runs residual | 0.009422266303 |
Runs probability | 0.0389507154213 |
Amino acid sequence | MWGLCYPDGASSPRDLPWRPWKILRRTPLSGEILHQP |
Secondary structure | LLLEELLLLLLLLLLLLLLHHHHHHLLLLLLLELLLL |
PRMN | - |
PiMo | - |