NONHSAT058618

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT058618

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

3073 nt

Genomic location

chr18+:19995319..19999016

Exon number

2

Exons

19995319..19998116,19998742..19999016

Genome context

Sequence
000001 CAAAATACTA TCCTGGGAAT TATAGTTCCA TTAAGTTTCA ATCTGAACAA AAGTGTAATC ACTTAAGTAA CAGCAGTTAC 000080
000081 TTAAACTGAA AATGAGATCA GTCAAAATTA CTTTTGAAGA GGGCAAACAT GTTGTTAGGT TTCTTGCTGT CGTTCTGGAT 000160
000161 GTTCAGCAGC AGGCTCATTT GAAGTCGGAC TCAACCCTGA TGGAAACTCA TTCTACCTTC AGAATGTGGG GGCTGGGGGG 000240
000241 AAAAATGCAG GTCTTGGGGG ACGGTAAGGA AGAAAACCTC TCGGTAAATA GACATTTCTC ATTGCAAATG GAGCACGTGG 000320
000321 TGGACCTGGG ACATCCCTTG GAGAAAAATA ATCTGGAGAA GCTCCAAACA CGGTTCCTGG AGGAGGTGGG GGGAAAGGAG 000400
000401 GTCCTCTTCT TATGAACGGG CCCCTTGTAT CTACTGGAAA CAATAAACCT CTGATTGGAG CAAGAGGTGG AGGAACAAAG 000480
000481 CCAGGGCCAG TTGCTTCATT TTCAGCGGGG AGAGATGAAT CAGGCACCTT TAAATTACCA AGATTATCTT TGGTATCATT 000560
000561 TCTACTGGAT TCCATTTCTG AAGGCATTGA CCCATCCATT TTATCCAAAG AAGGCATATT AAAACTTCTG AGTTCTGCTG 000640
000641 GTCCAGAGAG TCTAGCACAA TTAGAATAAA ATCTGTCTTG CCTTTGTGGA GGGAGAGCTG AATCAGGATA TGATTGTCCT 000720
000721 GGTGGAGGAA ACATCATCCT ATAGTCCTGT TCCCACGGAG GTGCCAGGGG CCCAGCGTCA GAAGGAGCCC TGTGAGGATC 000800
000801 AGTTAACCTA TCACAGCTTG ATTCTCCTCT TTCTTTGGTA ATCTGATGGT CCGGAGGATT CCCTGGGCCT CTGGAGCCTC 000880
000881 TTCCTCCTCC CCGTGGAAGC AAAGGTGAGA GTCTGAGAGG ACCTTCCAAC AAAGTTGGAG GATAGAGAGA AGCTCTCGTT 000960
000961 TCAGATGAAG GCCAACCCAA TGGTGAGGGA CCATATGGGG AATGCTGTCT GCCAAATGCT GTATTTGGAA CATCAAGTCC 001040
001041 ATAAGGATCT TTTTCTAAAA GTTTTATTTT AAACTCTATT TCAGTTAATT TTTGTCTGTT GTGAGCATTT TCTTTCCTTA 001120
001121 AATCATTGAG GTTTCTTTCA GCAGTCCAAG CTGCCGACCA ATTATCATGT GCTTTTTTCT CATGGAGAAT AATCTTCTTT 001200
001201 TGATAAAAAT GAATAGTTTT CTCAAATTCT TTAAGATCTT TGGCTCGCTT TCGGTAGGTC TCCAGCTCTT CAGTGGCATG 001280
001281 GCTGATCATT TCGTCTACTT TAGAAAGTTT CTCTTCTTTC TCTAACCGGC ATTTTTCCTC TACTATTAAT TTCCTGTAGA 001360
001361 GTTTCATTTC ATTTTCTTGA TATAATTCAG TCATTACTTT AAGTTTCTGC TGAAGCTTCT GATTCTCACT TTCAAAATGT 001440
001441 GTGTTTTCTG ACTGCAAAGA TGCTTGTTCA GTCTGAAGAT TTTTAATATG CTCTGTAAGC TCTTCCTTTG TTTTATCAAC 001520
001521 TTCAGATAAT TGAATATAAA TTTGGTTTCT TTCTCCTTCT AAGGTTTTTA AGGAAGCATT TAACTTAGCA GCATGAATCA 001600
001601 GTTTCTTCAA AGCTCCTTTT GGAGGATTAT CTAAGTAAGC ACCATCTTCC GATTCACTGT TCATTTCTAA TTCCAAGTTA 001680
001681 TCATCATCCG TTACATCTTC TTCAAGCATA GCAACCCCAT CTTTCATCTT TAGCAAGCGT TCAGTCAGAG TCTTGATGTG 001760
001761 ATTTTCTTTA TCATTTAGAA CTTGTTCTGC ATGTACTTTG GAGTCTTCAA ATGTTCTTTT CTGTTTAATA AGTTCACTCA 001840
001841 CTTGTTCTTT CCATACTTCA GCTTCTTGCA AAAGCTGTTT CTGGCTTTCC TGAAGTTCAG AATTTTCTTT CCAAGCATCT 001920
001921 TGTATTTCTA TCTCCAACCG TTCTTCATTC GCTTGAAATC TCTTGAAGGT CATTTTGGCT TCAGCTACTT GTGATTTGAG 002000
002001 GGATTTTGAC TCATCTTCTA GCGACTGTAT CCTTTTGGAA ATATCCGCCA TCAATTCATT TTGTTCAGAA TGTTTAGATT 002080
002081 TCTCTTCTTT TAACTCTTTT TCTAGACAGA GTATTTCATG CACAAGTTCA GAATTGAACC TGTTCAGCTT TTCGCAGGTT 002160
002161 GCCTCCAAAC TTTGTGCTTC TGTTGCCTCC TTCTCAAAGC TGGCATTCTT TAAAGATGAC TCTACTTCAT AGCCTTCATA 002240
002241 CTCTTTTTGA ACAAGGCTAA ATTTTTCAAG TAGTTTACAT TTTTCTTCAA TTAGTCCAGA AAGTGCCACA GCAAACTTTT 002320
002321 TCTCTCTTCT CACATAAAGC CGACTCGTAA CTGATCTAAA ACTTCTCCAC AAGAAGAGAA CAGCAAAAAA TCCAGCAACA 002400
002401 GCTGCACGTA TCACCAATTC CCATGGAAAA CCATAAGGAT GAGAATCGGG TCTCATACCT TCAGTCAGTG CTGCCACAAC 002480
002481 CCTGCGTAGC AACTCCAGGA CCAGCCCCAG GTATGGCTGA GGGTTAGCCC TAGGCTCCTC CGTAGCGCCA AGGCTGCTCT 002560
002561 GGCGGTTGCT GCAGTAACCT CGGCCACAAC AAACGCTGGA GAAGACGCAG CATTCCGTTT GGAACCTGAA TCCCTAACGG 002640
002641 GCAACCGGAG CGTACCACTG CGGAGCCGGC TGCGGGGGGA GTTAGGGGAC GCGGGCACCC GTAGGCCTCA CAGACCCACA 002720
002721 CTGCCCACCC CGGTACCTTT GTTACACTTT ACATCCTGAG GAAGCGCTAA AACCTATATT TTAAAACAGT ACCACATGTC 002800
002801 ATCATCTCCC GCCCATGCAC ATATCTTCAA CTCATCTGGA AAGCTTGCTC CTGCAGCAAT GGGTATGCCC ACTAGGTTAT 002880
002881 AAATCAGCGC CAGGACCAGT TTGATGCATA TCCTCTGGAC AGTCATCTTG GAAATATGAA TGCTAGCCAC CACATCCAGC 002960
002961 AAATCATTTT TGATGAGGAT GACGTTGGCT GCCTCGATGA CCACATCCGT GCCAGTGCCA GTGGCAATGC CCAAGTCTGC 003040
003041 CTGGGCCAAG GCCAGGGAAT CATTGACCCC GTC
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Predicted Small Protein

Name NONHSAT058618_smProtein_1790:1993
Length 68
Molecular weight 8344.9141
Aromaticity 0.358208955224
Instability index 41.1717910448
Isoelectric point 9.84429931641
Runs 8
Runs residual 0.0239118543409
Runs probability 0.0325030913266
Amino acid sequence MYFGVFKCSFLFNKFTHLFFPYFSFLQKLFLAFLKFRIFFPSILYFYLQPFFIRLKSLEG
HFGFSYL
Secondary structure LEEEEEEEHHHHLLHHHHHHHHHHHHHHHHHHHHHHHHHLHHHHHHHHHHHHHHHHHHHL
LLLLLLL
PRMN LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHH
HHHLLLL
PiMo iiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTT
TTTiiii