NONHSAT058447

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT058447

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

1291 nt

Genomic location

chr18+:13542303..13543593

Exon number

1

Exons

13542303..13543593

Genome context

Sequence
000001 CAGTCTGGCG CCATCTCCCT CCTTGCCTGG AGTCTGATCT GTCCCGGCCC AGTGTCCTCC AGGACCCTGG CCCCTCATGC 000080
000081 CTCCGTGCTT GCGCGTGTGC CATTTCCTCT CTCCAGAGGA CCTTTCCTGC CTAGGACTCA TGATTGTCCC CTCCCTGGTA 000160
000161 AGCCATCCCC GACCTTCCAG GCAGAACCTG CTGGCTTCTC CTCAGCACTT TGCATGGATT TCTGTCACAG TCCTGGGTGC 000240
000241 ACTGTGTCGC CCTCTCTATG TGTCAGCCTC CCGTCCCCTA CCGTGGGCTC CTCCAGGGAG GTGTGGACAT TCATCCTCTT 000320
000321 CCAGGCAGCC CTCAGGAATC CAGGGAGAAG ATAAGGAGGC GGGGCGGGCG GAGGTGGGTG CTCCACACAC TCAGAACACT 000400
000401 TTCCTCTGCA CTTACTTCAT TCTGGTTTTT CTTTTGGGTC CTTGGTGTTT TTAAATAAAC CCTTTCCTGT AGTTTGCTCC 000480
000481 CCTTCCATGG AGGGCTGTTT CGAGCACAGA TCTGCTGGGT GTCTGTATTT ACAAAGAGAA GGGGCCACTC GTGTGTGAGC 000560
000561 AGCACCGAGG GACAGAGGTA CCTTGCCTGC TTGTGTCCCC TCCAAGTCCT TCTGATATTT TCCTTTCCAG CTGTTGCCTA 000640
000641 GTTTCCTGGT ATTAAGGAGA ATCAACTCTC TGGATAAACG TGGTAAATAT GGCCCATAGT CCCATCTTTT TACAGGCATT 000720
000721 TTTTACACCT GGAGCAGCCA GAGGACGCAT GCATGGCTCT TCGGAAGGTA ATTTAGGGAT CACCCATGTA AGTTTCCTAA 000800
000801 GGATTTCTTT AACATGGTTC TTCTGATTCA GTCCGGCCAA TTAAATCTAA ATCCACCCCT GAAAGCCATC TGGTGTGGAT 000880
000881 AACAAGCCCA CAAATGAGCA GTCAGCTTTT TGTGCCCTTT AGGGCCTGGG ACAACCACGG GATCTAAAAG GGGCTGGAAC 000960
000961 TAGAGGTCTT GAGCTCCTGT TCCTAAAATC ATCTTCATCC TATATCTGCA GCCTTCTCCT GCCACGGCAT GCACCCACAC 001040
001041 ATGCGAGCCT CCCGGGTACT GTCATCCTGA ATTCTGAGAC CATCCAGCAC TTCCTTTAGT TTTGCCCTGG TGCTGTTGAC 001120
001121 TTTTGTTTAC TGAAGAGTGT GCTGGAGGCA GGACAAGGGA CATGGAAGGC TGCAATTTAA GAGTCTAAAA GGTTTTAGAA 001200
001201 TCCTGAAGGA GGTTTAACAA GCTGAATTGA AGAATAATAC CTTTCTCAAC TGGAGAGAAT TTACATGATT GCATTATTGT 001280
001281 TAAAATTAAC A
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Predicted Small Protein

Name NONHSAT058447_smProtein_257:457
Length 67
Molecular weight 7666.8953
Aromaticity 0.136363636364
Instability index 77.6
Isoelectric point 11.5473022461
Runs 11
Runs residual 0.0160587915079
Runs probability 0.0341250341251
Amino acid sequence MCQPPVPYRGLLQGGVDIHPLPGSPQESREKIRRRGGRRWVLHTLRTLSSALTSFWFFFW
VLGVFK
Secondary structure LLLLLLLLLLLLLLLLEELLLLLLLHHHHHHHHHHLLLEEEEEHHHHHHHHHHHHHHHHH
EELEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHH
HHHHLL
PiMo ooooooooooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTT
TTTTii