NONHSAT058402
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT058402 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1063 nt |
Genomic location |
chr18+:12912843..12913905 |
Exon number |
1 |
Exons |
12912843..12913905 |
Genome context |
|
Sequence |
000001 TGATGGATCC TCGGATTATA ACAGAGAACA TGGCGGCCCA GAGGGAATGG ACCCAGATGG TGTCATCTAG AGCAACTGGG 000080
000081 ATGAGATTGT TGATAACTTT GATGATATGA ACTTAAAGGA GTCTCTTCTT CGGGCCATCT ATGCTTATGG TTTTGAGAAG 000160 000161 CCTTCAGCTA TTCGACAGAG GGCTATTATT TTCTGCATTA AAGATCCAAA AAGTAATTCC GGCACCTGGA GACTATATGG 000240 000241 GAGCCTGCAT TGTCTTGCTT GCATTGGTGG AACAAATGTT CGAAATGAAA CGCAAAAACT GCAGGCCGAA GCATCACATA 000320 000321 CTGCTGTTGG TACACCAGGG AGAGTGTTTG CTTTGTTAAA CAGAAGATAT TTTCTCCAGA ATGGATCAAA ACCTTTGTTT 000400 000401 TGGTTGAAGC AGATGAAATA TTGACCCAAG GGTTTAAGAA TCAAATAATG AGATTTTCCA AAAATTAAAT ACAAGTATTC 000480 000481 AGGTTGTGTT GCTTTCTGCC ACAGTGCCAA CTGATATGTT GGAAGTGACC AAAAAATTCA TGGGAGATCC AATTTGAATT 000560 000561 CTGGTGAAAA AGGAAGAATT GAACCTTGAA GGAATCCGTT TTATATTAAT ATTGAGAGAG TAATGGAAGT TGGATACACT 000640 000641 TTGTGACTTG TACGAGACAC TGACCATTAC ACAGGCTGTT ATTTTTCTCA ATACAAAGCA CACTGTCAAC TGACTGAGAA 000720 000721 AATGCATGCC GCGGACCTCA CAGTTTCTGC TCTGCGTGGT GACATGGACG AGAAGGAGAG AGATGTTATC ATGCGGGAAT 000800 000801 TCCAACCAGG GTCAAACCGT GTTCTGATCA CTACTGACTT GGTTTGTGGG ACTGATGTGC AATAAGTGTC TTTGGTTATA 000880 000881 AGCTATGATC CACCTACCAA TTGTGAAAAC AACATTTGCA GAATTGGCAG AGGTGGTTGA TTTAGGAAGA AAGGTGTGGC 000960 000961 TATAAACTTT GTTACTGAAG AAGGCAGGAG GATTCTTGGT GACACTGACA CTTTCTACAG TACTACAGTG GAGGAAATGC 001040 001041 CCATAAATGT GGCTGACCTT ATT |
Predicted Small Protein
Name | NONHSAT058402_smProtein_140:358 |
Length | 73 |
Molecular weight | 8236.0863 |
Aromaticity | 0.0555555555556 |
Instability index | 59.9 |
Isoelectric point | 9.12835693359 |
Runs | 9 |
Runs residual | 0.0159164639092 |
Runs probability | 0.0271055369095 |
Amino acid sequence | MLMVLRSLQLFDRGLLFSALKIQKVIPAPGDYMGACIVLLALVEQMFEMKRKNCRPKHHI LLLVHQGECLLC |
Secondary structure | LHHHHHHHHHHHHHHHHHHHHHHHHLLLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLEE EEEELLLEEEEL |
PRMN | - |
PiMo | - |