NONHSAT057241
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT057241 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
604 nt |
Genomic location |
chr18+:9856041..9859517 |
Exon number |
2 |
Exons |
9856041..9856351,9859225..9859517 |
Genome context |
|
Sequence |
000001 GGAATGCTGA CTCTCTCACA TCTCAAAACT CTTCCTACCA AAGGAGAAAA ATGAAGTCTG AGAAATATTT TACTCTAATA 000080
000081 AGTGAAATTT TGAATATTCT GAAGATAAAA GAACCTGGCA CTCCTAAGAA GCCATGTTCA ACAGCTGATT CAAGAGTGCT 000160 000161 GCTAAGAGTT CAAAACATGC AGGAGGGGAG TCTTCTTGAG ACAGAGCCAG GCCTTCCTCA ATTTTGCATT CTGTGCATCA 000240 000241 GTGCTCATTG TTGACTGGGG AGAGAAATGA GAAGCAGCAA AGAGGAAGGA GGTGGCGGAA AGCGGGGAAA GGCCGCCAGA 000320 000321 TCCCACCCTT GGACCCCCAT GAAAATGGAA ACAATGGAAC AATCAAAGTT GAGAAGCCAA CCATGCAAGC CAGCCGCCGG 000400 000401 TGCTGTTGAC CCAAGGGCCG TGGTCCACGG TACTTGAAGA AGCCAGAGCC CACATCCTGT GCACTGCTGA AGGACCCTAC 000480 000481 GCTCGGTGGC CTGGCACCTC ACTTTGAGAA GAGTGAGCAC ACTGGCTTTG CATCCTGGAA GACCTGCAGG GGGCGGGGCA 000560 000561 GGAAATGTAC CTGAAAAGGA TTTTAGAAAA CCCTGGGAAA ACCC |
Predicted Small Protein
Name | NONHSAT057241_smProtein_50:253 |
Length | 68 |
Molecular weight | 7492.7995 |
Aromaticity | 0.044776119403 |
Instability index | 47.423880597 |
Isoelectric point | 7.65667724609 |
Runs | 11 |
Runs residual | 0.0208642650621 |
Runs probability | 0.0460968990381 |
Amino acid sequence | MKSEKYFTLISEILNILKIKEPGTPKKPCSTADSRVLLRVQNMQEGSLLETEPGLPQFCI LCISAHC |
Secondary structure | LLLLLLEEHHHHHHHHHHHLLLLLLLLLLLLLLLEEEEHHHLLLLLLEEELLLLLLEEEE EEEEELL |
PRMN | - |
PiMo | - |